Tag | Content |
---|
EnhancerAtlas ID | HS059-01228 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:36640720-36641500 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RREB1 | MA0073.1 | chr1:36640881-36640901 | TTGGAGGTGGTGGCTGGGGG | - | 6.01 | ZNF143 | MA0088.2 | chr1:36641137-36641153 | TTCCCACCATGCCCTG | + | 6.68 |
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| Number of super-enhancer constituents: 34 | ID | Coordinate | Tissue/cell |
SE_01636 | chr1:36639363-36642688 | Aorta | SE_02424 | chr1:36637536-36641898 | Astrocytes | SE_03303 | chr1:36640401-36641966 | Brain_Angular_Gyrus | SE_04066 | chr1:36635282-36642062 | Brain_Anterior_Caudate | SE_05024 | chr1:36635411-36642207 | Brain_Cingulate_Gyrus | SE_05887 | chr1:36635175-36642577 | Brain_Hippocampus_Middle | SE_06862 | chr1:36637689-36642475 | Brain_Hippocampus_Middle_150 | SE_07920 | chr1:36637211-36642326 | Brain_Inferior_Temporal_Lobe | SE_08864 | chr1:36640568-36641008 | Brain_Mid_Frontal_Lobe | SE_09456 | chr1:36640331-36641927 | CD14 | SE_11597 | chr1:36639995-36642022 | CD20 | SE_13759 | chr1:36640356-36641578 | CD34_Primary_RO01536 | SE_17467 | chr1:36637513-36641496 | CD4p_CD25-_CD45RAp_Naive | SE_25992 | chr1:36640787-36641930 | Duodenum_Smooth_Muscle | SE_26652 | chr1:36641096-36641941 | Esophagus | SE_29723 | chr1:36639357-36643266 | Fetal_Muscle | SE_31707 | chr1:36640599-36641498 | Gastric | SE_35879 | chr1:36635038-36641877 | HMEC | SE_37181 | chr1:36638950-36642312 | HSMMtube | SE_38303 | chr1:36640356-36641853 | HUVEC | SE_42156 | chr1:36637483-36645577 | Lung | SE_44877 | chr1:36640506-36641948 | NHLF | SE_45971 | chr1:36640330-36641986 | Osteoblasts | SE_48111 | chr1:36637561-36644467 | Psoas_Muscle | SE_48599 | chr1:36637598-36645926 | Right_Atrium | SE_49470 | chr1:36639734-36642039 | Right_Ventricle | SE_50384 | chr1:36640326-36642018 | Sigmoid_Colon | SE_51235 | chr1:36634868-36644429 | Skeletal_Muscle | SE_52691 | chr1:36640319-36641949 | Small_Intestine | SE_54589 | chr1:36637600-36649657 | Stomach_Smooth_Muscle | SE_62466 | chr1:36605507-36654228 | Tonsil | SE_64044 | chr1:36640385-36641925 | HSMM | SE_64339 | chr1:36640472-36641554 | NHEK | SE_65351 | chr1:36639964-36641958 | Pancreatic_islets |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I036169 | chr1 | 36635209 | 36645287 |
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Enhancer Sequence | CCCCATCCCC ACTCTACCTT ACCCAGGGCT CTGTGCCCCT CGGGGGAGCC GGCATATGGG 60 TCTGGACCCT GAGGACAGAG GTTGCCCTGT AGGAGAGGAG AACAGAGACA AAGCACAATG 120 CCGCAGAGGG CAGGAAGCCT GGCAGGAGCC TCAAGAGCAA GTTGGAGGTG GTGGCTGGGG 180 GTGGGGACAG GCAGGCAGCC TTTTCTGCAA CCACAGCCAG CTGGTCTGGG CCAACCTTAG 240 CCAGGTGGCA TTGTCCCCAT GTGTCAGACT GGCCTGGGTG CTGTGGGGTG GAGGGGTCCC 300 TCATTCTGGC TCCACCCTAG AGGGCCCATG CAATCCTGCC CTCTCTGTCT TCAGAGCCCC 360 AGTCATGGCC TTGGCTGGTC CCAGAGTTGA GCCAACCAAG GTGGCATAGC CCCTGCATTC 420 CCACCATGCC CTGGTGCTCA TATGTGAAGG AGCCATGGTG GGAGTTATTT ATAAGTTTCT 480 CTTGCATTTG TTTGGCTGCT TTGTTGCCTA GCAACCAAAT CAGCTGCTGT ACCAACCCCA 540 CCTGACTGAG GCTTAAAAAT AGCCCAGCAG CTGAGGGGAC AGAGCAGGGT GGCCTAGGGC 600 AGGCAGGCAC CCTAGCAGCC TCTCCCTGGC ACAGGACTGC TAAAAGCTGG GTCAGAGGAG 660 CACAAGGACC CTCACTGTCC TGAATCCATG GGACAGCCTC GGCTGGGTCA GCCCTCTGAC 720 AGCAGGAGGG GCAAGACCTT ACACTGGGAC ATGGCAGAGG GCAATTGGGT TTTCTTCCAA 780
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