EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS059-00921 
Organism
Homo sapiens 
Tissue/cell
GM12878 
Coordinate
chr1:27888920-27892930 
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
E2F6MA0471.1chr1:27890271-27890282GCTTCCCGCCC-6.02
HNF4GMA0484.1chr1:27890632-27890647GGAGGCCAAAGTCCA+7.22
Hnf4aMA0114.3chr1:27890633-27890649GAGGCCAAAGTCCAGG+6.26
RREB1MA0073.1chr1:27891686-27891706CCCCCACCCACCCGCCGAGG+6.28
Number of super-enhancer constituents: 44             
IDCoordinateTissue/cell
SE_00527chr1:27889462-27891915Adipose_Nuclei
SE_00861chr1:27886075-27904718Adrenal_Gland
SE_01588chr1:27886149-27904879Aorta
SE_02913chr1:27887486-27889346Bladder
SE_02913chr1:27890049-27890615Bladder
SE_02913chr1:27891079-27891732Bladder
SE_03261chr1:27889156-27892628Brain_Angular_Gyrus
SE_03939chr1:27886198-27895237Brain_Anterior_Caudate
SE_05478chr1:27885928-27895152Brain_Cingulate_Gyrus
SE_05814chr1:27880294-27902223Brain_Hippocampus_Middle
SE_06945chr1:27886514-27895216Brain_Hippocampus_Middle_150
SE_07770chr1:27885748-27895172Brain_Inferior_Temporal_Lobe
SE_08953chr1:27889480-27889882Brain_Mid_Frontal_Lobe
SE_08953chr1:27890875-27891588Brain_Mid_Frontal_Lobe
SE_14757chr1:27885672-27892439CD4_Memory_Primary_7pool
SE_23479chr1:27888886-27895065Colon_Crypt_1
SE_24168chr1:27889383-27892160Colon_Crypt_2
SE_24711chr1:27888433-27889356Colon_Crypt_3
SE_24711chr1:27889725-27892508Colon_Crypt_3
SE_25901chr1:27889480-27892932Duodenum_Smooth_Muscle
SE_26518chr1:27885702-27904919Esophagus
SE_27625chr1:27889852-27891463Fetal_Intestine
SE_28547chr1:27889632-27891469Fetal_Intestine_Large
SE_29557chr1:27886726-27904956Fetal_Muscle
SE_31394chr1:27886081-27904513Gastric
SE_33503chr1:27886818-27904912H2171
SE_34367chr1:27889551-27891748HCT-116
SE_34755chr1:27889435-27891507HeLa
SE_36974chr1:27887536-27905229HSMMtube
SE_39896chr1:27887871-27891386K562
SE_40593chr1:27885841-27904966Left_Ventricle
SE_42106chr1:27886079-27904957Lung
SE_46630chr1:27886679-27892191Ovary
SE_47670chr1:27888826-27892075Pancreas
SE_48058chr1:27885887-27904727Psoas_Muscle
SE_48567chr1:27886102-27904727Right_Atrium
SE_49444chr1:27886820-27892209Right_Ventricle
SE_50130chr1:27886169-27892585Sigmoid_Colon
SE_51091chr1:27886184-27904991Skeletal_Muscle
SE_52467chr1:27889204-27891715Small_Intestine
SE_53892chr1:27886040-27904947Spleen
SE_54527chr1:27885939-27904929Stomach_Smooth_Muscle
SE_65253chr1:27886204-27900313Pancreatic_islets
SE_68682chr1:27886365-27891995H9
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 4             
ChromosomeStartEnd
chr12788901927889666
chr12788986027891017
chr12788972427889774
chr12788980027891375
Number: 1             
IDChromosomeStartEnd
GH01I027559chr12788613127905256
Enhancer Sequence
TTAACAGTTT CAGGGGCAGG AGAGGCAGGA AATAGGGTCC CCAGGCCCTC AGGGACACAG 60
CCCCCTGCCT CCCATGCAAA CCCTGCCTTG GTGCCCCACC TCACAGACAC ACACCTGCCC 120
TGGCCCTAAA GGCCCTTCTC CACACCATCT GAAGAATGCT GGGTCCCTCC CCCTGGGGAA 180
CAGTCCCACG GGCTGACATA TGGGTGAGAG GGTAGATCAT GCGGGACTGA GCACCCCCCA 240
GCTCCCACTT GTCCCTCTGC TCAGGGCCCT AAGCATTTCC TCTGGCCAGC CCTTTGGGGC 300
TCTGTGGTCT GCATGGGAAG GCCCCACCAG CTGCCAGCCC CGTATCACCA GAAAACATGT 360
CGTCTCTTTA GAGTGAGACA CGAGCTCCCA AGTTACTGAC AACTTCCCAA CAGCATGAGA 420
GAATCACACA TGCCACTCCC CACAACAGCC TGCGACGGGC ACATGGTGAC ATCTCACACA 480
CACAACAGCC AGAGACAGGC GCACAAGTTG GTGACAACCC TCCTAACGGG ATGAACTAAG 540
CACATAACCT GTCGCTTCCT CCAAACATGA GATGGGCACA CCTGACACAC CCTCGACAGC 600
ATGGGGCAGG CGTCTGTTAC CCCTCACAGT GGCATAACTG ACACGCAACC AGGCACCCCC 660
ACACCCACTA ATGCACAGAG AACCTGTTAC ACAGCTGACC AAGACACACA CACACGCACG 720
CACGCATGCA TGCACACACC CACACAAAGA ACCTGTCACA TAGTTGACCA AGACACACAC 780
ACATGCACAC ACACACAGAA CCTGTCACAC AGCTGACCAA GACACACACA CACGCACGCA 840
TGCATGCACA CACCCACACA AAGAACCTGT CACATAGTTG ACCAAGACAC ACACACATGC 900
ACACACACAC AGAACCTGTC ACACAGCTGA CCAAGACACA CACACACACA CACACACACG 960
TGGGACAAGT CCCATCTTCC AGGTGTGAGG AAGGCATGGA CCCCTCCACC CACCACACAG 1020
CATGAGGCAG GGACATAACC TCGCCCCTGC CTGGGAATCC TCCCTGCAGA CTGTGGGATG 1080
GGTACACAAC ATGTCACCTC CCCGGCTGCC TTGGACAGGT GACAGCCCAC CTCACCCCTC 1140
CCCCATCACT GTCACCAGCC TGGGTGGTGC CGTCCCTCTG CCTGCAGAGG CGTCACAGCT 1200
CACACGGCAT GAATGTCACC CCAGCACTGC CAGAGCCGGG CACAGCCACA CATTGCCCCA 1260
GTGACAAACA CCACTGGCCC CAGAGGAGGT GAAGGCACAC AGGGCTCTGG TGTGACCTTG 1320
GCCTCTGGAC ACCAGGAGGG GAGGTGCTGT GGCTTCCCGC CCAGTGGCGG GTGCTGGGGG 1380
AGAGGAGTGC TGGGGAGGAA GCTGCCTGGA CACACTGACT ACCTGGAAAT GCCACCTCCC 1440
CCAGCCCTCA CTCCACTCCA TTTCTTATTC ACTGTAGTTG TGTATCTAGG GAGGGGGCTG 1500
AATGAGTGGT GGAGGGAGGG CTGTCCTGAG GCGCTGTTAC TATGAGACTG CTTAGAGATC 1560
AGTGGGGAGT AGGGCGGTTA GGGGTTGCTA TCACCATGTG CTCAGTGGGA AGAGTATGGG 1620
ATAATGGCTT GAGACCCCCA TAGCTTCCAG GGGAGCCCTT CTTCCTTACA AAGGCCCCCT 1680
CTCCAAACTT CAGGCCACAG AGCTGGGGAC AAGGAGGCCA AAGTCCAGGA ACATGACTCA 1740
CCCAGGGAAC AGGCCCAGCC TGCTGGCCAT AGTGGTGAGG GAGGCCAAGA GCCAAGAGGC 1800
CTGGGTTCCA GTCTGAGCTC CTCCAGGGCC AAGCTGGGTG ACCTTGGAGC AGCAGCTCAG 1860
CCTCTTTGGC TTCGGGGAGG GGGGAAGGGG CCGCAGTGAG AGAAGTGCCA GGGTCAGAAA 1920
GAAGAAGCTG AAGCTGGAGA CCAGCAGGCA GAACTTCAGG CCACAGAGGG CTCCAGCCCG 1980
CCTCCCCTGC TCCCCTGCTT CCTCACAAGG AACCTCATCT TCCTCATCTG TACAAAAGGG 2040
ACAAGAGTGC CAGCCTCATG AGACAAGGTA GCATAAAGTG GGCCGCTCCT CAAGAAATGG 2100
GAAGCTTCTG ATTGAAGAGA GGGAGAAATA GACTAAGAGA CTTGCCCAAG CCACAGAGCA 2160
AATTAGGATC AGCTGAACTC AGCCTCCATC TCCTGGCTCC CCACCTGGAG CTGTTTCTTT 2220
AAGACTGCTT GGAGGTCAAG TGTGGAGGGG GACAGGGGAG ATGTTGGGGT GTTGTTGGAT 2280
GCAGTGCCTC CCTGCCGCCC GATGAAGACC AATGAATCTG ATAGGAGTCC ACCATGCCCT 2340
ACCTTTACCC TAAACCCCAC TTGGCCCAAA GCTTGGACAA GAGGAGTGGC TCTAAGGGGA 2400
GGGAGGCACC CCACCTCCCA CCCCATCATG ACCAGCAGCA GCACCTGGTG CTTGGAAGGA 2460
CTAGAGGACC TGAGATGTCA GTGTCTAGGG CCCCTCGTTT TACAGGAGCC CAGAGAGGGA 2520
AAGGCCTAGC CTGAGGTCAC ACAGCACGAC AGCACAAGAG CCTAGAGTCC TGGCCACGGA 2580
CAGCCTCAGA GCAGAGTCCC CCTAGCCCCT GGGGGTGGCT GGAGCTGGGG GGCCCTGGGG 2640
GACTGAGTAA AGCGTGGCGA CAGATGGCCT GCCGAGGCAG CGGCGATCTG GGCGGCTGGC 2700
AGGCATGCTC GCTCCCGCGC AGGGAAGCGG CTAATTTTAG CTGAGGCCTC GATGCCAGCT 2760
TTGTTCCCCC CACCCACCCG CCGAGGGGGC CCAGCATGCC TTGCGTGCAA CCTGCCTCCC 2820
CCAGGCACCC CTACTCCCCC GCCTGGCCCC TTGGTGAGTA GTGCCCAGAC CCCAGGATCC 2880
TAGAACGGTC TGCCTGACCA GGCCTCACCA CACCCAGAGG TGAGGCCTGA CTCCCCTACC 2940
CCAGGGCCTG TTTGCCCACG ACTCCAAGCT CATTCCATGA AGAGGGGCGA GAGAGGAAGG 3000
ACAGAGGCCA CTGCCCAGAC TGGGAGGGCG GGCCAGACAG CAGGGGCTGC CAGTCTTGAA 3060
GGGAGGCGAG GCACTGTCCT CCACCCAACC CTTAAGGAGA CAGGACCCTG ATTCCACCCA 3120
TGCCCTGGAC AAACATTCTG TCTGGTGTCC CCCGGCGCTG GTGAGCAAGG GGCGGGAGTC 3180
ACTCTAGTCT TTCCTTGTTC CTCATAACTT TGAGTTTGTT CCAGGAACTC AAAGCACTTT 3240
AAAGAAGTCA GACATGAAGC AAGGATAGTA TCCCTATACC ATCTGGGGAA ACTGAGGCAC 3300
AGTCTGAACT TGCCATCATT TTAGCAAGGG AAGGGACAAA TCCCAAGAAT CAGTGAGGCC 3360
TGTTCTCTAG AGAGCTTCTT GGGCCAGTTT AGCTCCTGGA ACTATCTTCT GTTCCTACCC 3420
TGGGCTAGTG GAAGGTAGAC TAGATGGATG GAGCCCATCC CCTAAAACCC TGGAAAGGCA 3480
GACTCACACT CTTGTTTCCT GGTGCCACAC TCTCTGTAGG CTCTTCAACC TTGCACCCTC 3540
CATTTCAGGT TCAACCACAT AAGCCCAGTG GGGCTTCCAG GACATCTGGC CCCTACTAAA 3600
AAGAGGGATC CTTTGGGGTG ACTCTGGAGC CCTGCCCCCT GCACCAGCTC CCCAATCTTC 3660
ATAGGCCTGG GAAGGAAACA ACCTGGTAGG AAATAGAGTA AGGAGAACTG AAAGGCCCAG 3720
CTCTGAAAGA AAGATATGTA TTTAGAAGGA CAAAGTCAGA AGAAAGACAG GGGGCGGGAG 3780
AAATCAAGGC AGAGATTCAG ATCCAGGAAG AGAGACAGAA AGATGAAGGA CACTGAGGCA 3840
AGAGAAACAG GGCAGAAAGA GGCAGAAGGA GAAAAAGATC TGGAGGGAGG GGGCGAGAGC 3900
CAGAGAGGGA GAGAGAGGGC GACCATGCCA GAGGAAGGAA AACAGCAAGA AAGAGACTCA 3960
GGAAGAGAGA GAGACAAGGA GAAAGAAAAA GACAAAAGAG AGAGACAGGC 4010