| Tag | Content |
|---|
EnhancerAtlas ID | HS059-00634 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:22430560-22432550 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr1:22432306-22432325 | CAGCCACTAGATGGCAGAG | + | 6.58 | | SREBF1 | MA0595.1 | chr1:22431866-22431876 | GTGGGGTGAT | - | 6.02 | | SREBF2 | MA0596.1 | chr1:22432460-22432470 | ATCACCCCAT | - | 6.02 | | ZNF143 | MA0088.2 | chr1:22431899-22431915 | CAATGCATTGTGGGGC | - | 6 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_09508 | chr1:22430977-22432325 | CD14 | | SE_11109 | chr1:22425016-22433774 | CD20 | | SE_17408 | chr1:22428776-22432535 | CD4p_CD25-_CD45RAp_Naive | | SE_18436 | chr1:22428418-22434104 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19267 | chr1:22429596-22432122 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_22843 | chr1:22429163-22432634 | CD8_primiary |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr1 | 22431995 | 22432408 | | chr1 | 22430694 | 22430790 | | chr1 | 22431175 | 22431600 |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH01I022103 | chr1 | 22430404 | 22432207 | | GH01I022105 | chr1 | 22432221 | 22432370 |
|
Enhancer Sequence | GGGGAGGCCT CAGGAAACTT ACAGTCATGG TGGAAGGGGA AGCAAACACG TCCTTCACAT 60
GGCGGCAGGA GAGAATTGCA GAGCAAAGTG GTGGGGGGTA GGGGGAAGCC CCTTATAAAA 120
CCATCAGATC TTGTGAGAAC TCATTATCAC GAGAACAGCA TGGAGGTAAC CGCCCTCATG 180
ATTCAGTTAC TTCCCTCCAA GTCCCTCCCA TGACATGTGG GGACATGGGG ATTATGGGAA 240
CTATAATTCA AGATGAGATT TGGGTGGGGA CACAGCCAAA CCATATCAGT ACCTCTCATG 300
ATGCAGTAGG ATGACCAAGA CAAAATTCTT AAACTGGCGG GACTTACATT CTAGTAGGGG 360
GAGGCAGACA TGATTAAAAT GTGTATGTCA GAGATGGTGT TAAGTGCTGT AGAGAGAAAG 420
TACGGGACTC CACAGTCCCA TCAGGTCTGA TTACTTACAC TTCTCGGATT TAAAAAAGGA 480
GATCCTTGAA AGTCTTAAAA GGCTATAAGG AAGAAAAACT GCTTCTCAAA ATCTAGGTTT 540
TGTATATATC GTAGAACTGT AAGTATTTTA AAGAGCTAGA AGATTCAGAT TATGTTTATT 600
TCCTCTCTGA TTTTAATTGC TTTGAGGATA TTATAGTCTT ACTTGGTTCA AGTTAGTTGA 660
ACTTGGTTCA GGCCAAGTTA TCAGTAATGG GAATGATAAT GATAGGTGAG TCTCTCTTTA 720
AAAAGACAAT GGGAAGGACT TTTAGAGGTT ATTTAGACTA GCCCTCTCAA TTTTGGCGGG 780
GTGGGGTGAG TGTAACAGCT TTATTGAGAT ATAATTCCTG TACCATACAA TTCACTTAAA 840
GTGTACAAGT CAGTGGTTTT TAGTTTATTC ACAAAATTGT GCAACTATCA CCTGATAAAT 900
TTTAGAACTT TCTCTTTCCT TCAAAAACTC TTTTCTTCAA AAACACCCTT TAGCTGTCAT 960
ACCCTGAAAC TTTCTGCCCC ATCTGCCCAG CCCTAAACAA CCGCTGAACC ACTTCCTGTC 1020
ACTGTAGATT TGCCCATTGT GAATACTTCG TATAATTATA ATATGTAGTC TTTTTTAACC 1080
AACTTGTTTC ACTTAACGTG TTTTCAAGGT TCATCCGTAT GGTAGCATGT GTCATTACTT 1140
CATTCCTTTT TATGGCTAAA TAGTATTCCA TTGTATGGAG ATACCACATT TTGCTTATTC 1200
ATTCCATCAA ATGATGGACA CGTGAGTTAT TTCTACCTTT TGGTTACAAT GAACATTGTG 1260
TACACATTTT TACATGATCT CTCAGTTTTC AAATGAAGTA AATGTAGTGG GGTGATTTGC 1320
CCAGTTCCCA GTGTGGTTCC AATGCATTGT GGGGCTCCGG AGGAGGCAGT GGTGCCACCT 1380
GCTTGACCAA GATCGTAGCT AGCTGTGAGG AGCTTGGAGC ATGTAGGCAT TTCTGGAAGA 1440
ATTGAAATTA TGTTTAGTTT CAGGGCCTTC TGTTCCTTCA GGAGGAGTGA TACAATGGCA 1500
TGAGGATGGA CTTTGGTATC ACATTTTCTA CTGAGCCTCT GTAACCCTGG ACAGGTGACT 1560
TCTATAAGCC TTGGTTTTCT CATTTGAAAA ATGGAATTAA TAATGTACCT TGCAGTGTTG 1620
TGAAGACTAG CAATAACATA GGTAAAGCAC CCACCAGATC TAGCTGTGTA AGTGGTATCA 1680
TCATTTAGGA AGTTACTGGA AGGACCAAGG AAAATGACGA TGAGGTGGGC CTGTAATGAT 1740
CCAGAGCAGC CACTAGATGG CAGAGAAATA GCAAGAAAAG ACTGGCTGGT TGTGCACCTG 1800
GAACTTAGTA AGGTTTGTTA AGCTTCTTTC TAATTGTCCT TAAGAGGAGA GTACAGGCTC 1860
CCACATTGCT GGGAAAAGAG CCCACCGCCC ACAGAATGTC ATCACCCCAT ACCTGCAGCC 1920
TGTGCAGATA TAGAAACACT ACTGTGCGCC AAATTCGATA ATCTTGCTTC TCATTTCTTA 1980
AAATAATTGC 1990
|
