Tag | Content |
---|
EnhancerAtlas ID | HS059-00552 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:19788980-19790750 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr1:19790721-19790739 | GGAGGAAAGGAAGAAAGA | + | 6.08 | NFIA | MA0670.1 | chr1:19790188-19790198 | ACTTGGCACC | - | 6.02 | ZNF263 | MA0528.1 | chr1:19790718-19790739 | AAAGGAGGAAAGGAAGAAAGA | + | 6.78 |
|
| Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
SE_00361 | chr1:19789558-19790542 | Adipose_Nuclei | SE_10714 | chr1:19788847-19792129 | CD19_Primary | SE_12250 | chr1:19788863-19790919 | CD3 | SE_13780 | chr1:19789309-19790594 | CD34_Primary_RO01536 | SE_14589 | chr1:19782676-19793243 | CD4_Memory_Primary_7pool | SE_15716 | chr1:19788965-19790989 | CD4_Memory_Primary_8pool | SE_16772 | chr1:19788845-19790548 | CD4_Naive_Primary_8pool | SE_17553 | chr1:19780030-19800464 | CD4p_CD25-_CD45RAp_Naive | SE_18042 | chr1:19782765-19793570 | CD4p_CD25-_CD45ROp_Memory | SE_18410 | chr1:19788739-19800215 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19269 | chr1:19788894-19790703 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_21264 | chr1:19788984-19790716 | CD8_Memory_7pool | SE_21829 | chr1:19788749-19790909 | CD8_Naive_7pool | SE_22220 | chr1:19787200-19790952 | CD8_Naive_8pool | SE_22607 | chr1:19787028-19798132 | CD8_primiary | SE_23237 | chr1:19789482-19790340 | Colon_Crypt_1 | SE_23924 | chr1:19789560-19789896 | Colon_Crypt_2 | SE_23924 | chr1:19789926-19790354 | Colon_Crypt_2 | SE_26537 | chr1:19789395-19790551 | Esophagus | SE_29645 | chr1:19788840-19790129 | Fetal_Muscle | SE_31164 | chr1:19789081-19790517 | Fetal_Thymus | SE_31447 | chr1:19789507-19790336 | Gastric | SE_50058 | chr1:19788945-19790505 | Sigmoid_Colon | SE_52345 | chr1:19788942-19790504 | Small_Intestine | SE_53453 | chr1:19789314-19790703 | Spleen | SE_62519 | chr1:19761354-19815005 | Tonsil |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 19789389 | 19790246 | chr1 | 19789600 | 19790468 |
|
Enhancer Sequence | GTCATCTGGT CCAAACCCTC AATACAGGTG GGGAAACTGA GGCCCAAGGA GGGTAAGCAT 60 GTTAGATAAC TCCTGATAGT CCAACAGCAT TTACTGCAGT GTTTAAAAAA TAGTAGGCAC 120 GAAGTAAGCG CATTGAATAA ATAATAACCA CATATGAAAC AACATATTCA CCTATTCACC 180 TAATGTGCTT CAAAACAGTT AAAAACAGGT CCAGTTGAAT GGCATTCCCT CTGGCTCCTA 240 TCCAGAAGAA TTCTTTAAAG AAAAGTTCTC AATGGGAGTC AACATTCATC AGCACCCGCA 300 CTGTTCGCTA AGGCAGCCAC TAGCCTTCGA TAATTTCAAT TTATCAAATT GAATTCACTG 360 ATACTGAAAT TTCAGTCCAC TAAAATGAAA TAAAACCAAA TATTCAGTTC CTCAATCACA 420 CTAGCCACAT TTCAAGTGCT CAAGAGCTGT ATGTGGATAG TGATTATGGA ACAGCCCAGA 480 TATAGAACAT TTCCATCATC ACAGAAAGTT CCAGTGGACA GCACAGCTGC AAAGAGAAGA 540 TATCATTAAT GTGTAATTTC TGTTCTCATC CAGCAGATTT AGTTTCCTAA ATCCTATTGC 600 AAGGCAGCAG GAAGGGAAAG ACCTCGTTAG CCTTGCTTTA TTATGCAAAT CTGCATATTC 660 CTGTCAAGTC CAATCTCCCT CAGAAAGTTC AAATAGAGTA TTATTAGGTG GCTGCGCGGG 720 TCTACAGGGC AATGTCTGGG GTCTGAGGGC AGGTGAGAGT ACACAGGATT TTATGAAAAT 780 GTGTTCTGTG CAAACACCTC ACTTGTGCCG CTCTTCTCCA CACCAGCAAA CTGAGCATTC 840 TTTAACACAG TTCGGCAACC GCTGGCCAAG CCTCACTTAC ATAAGAGTGC CATAAAAGAC 900 TGGGTCGGCT GCTTCTGCAA AACACCTGTG GTTTTGCAAA AGGATGTGAT TTCTTAGAAG 960 TCAGTAAACA GGCTCATTTC CTTTACAGTT AAATTTTGGC ATCAGAATAC CAAAATACTC 1020 TATGACCCCA CCTAAGCTCA CATAACCTTA CTCCCCACCT TAAATGGTTG GGAGAGCAAA 1080 AGGCCCTGTG AGCTGGAACT GCCCAGGGTG CCAGCCTTGC TGCTGGGCCA GTGGCCACCA 1140 TGCCCACCTC CACCACTTTC CTTTGAGGCC CCAGGAGGCT GGTACACACT CCAGGAGCCA 1200 GGAAGACCAC TTGGCACCCT TAGCTCCTGG GACACTAGAA CACATGGCCA AGTTATAAAG 1260 ACTTCATATG CATCTTCTCA TCTGGAGGTG AGGCCCTTTC AAAGCACACA GGGTGGAGAA 1320 ACGTGGATAA TATTTCACCC TCTATGTTAA AAAGAGGAGA AATGAAATAT ATTTGTATTT 1380 GCTTGTTATG CCTAAAGAAA TGAGGACAGC AGGCCAGGCA CGGTGGCTTA TGCCTGTAAT 1440 CCCAACATTT TGGAAGGTCA AGGTGGGCAG ATCACTTGAG ACCAGGAGTT TGAGCCGGGC 1500 CAACATGGTG AACCCCTATC TCTACTAAAA ATACAAAAAA AAAAAAAAAA ATTAGCTGGA 1560 TGTGGTGGTG CACACCTGTA ATCTCAGCTA CTCAGGAGGC TGAGGCAGGA GAATTGCTTT 1620 AACCTGGGAG ACAGAGGTTG TAGTGAGCCA AGATCATGCC ACTGCACTCC AGCCTGGGCA 1680 ACAGAGCAAG ACTCTGTCGA AAAAGGGAAG AAAGAAAAGA GAAAAGAAAG AGAGGAGCAA 1740 AGGAGGAAAG GAAGAAAGAA AACCGAAAAA 1770
|