| Tag | Content |
|---|
EnhancerAtlas ID | HS059-00549 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:19727860-19729310 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Myod1 | MA0499.1 | chr1:19728661-19728674 | AGCAGCTGTTCCC | + | 6.92 | | TFAP4 | MA0691.1 | chr1:19728951-19728961 | AACAGCTGAT | + | 6.02 | | Tcf12 | MA0521.1 | chr1:19728660-19728671 | CAGCAGCTGTT | - | 6.32 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_01631 | chr1:19723726-19729381 | Aorta | | SE_05833 | chr1:19726303-19729509 | Brain_Hippocampus_Middle | | SE_18410 | chr1:19725443-19729168 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_25786 | chr1:19726004-19729195 | Duodenum_Smooth_Muscle | | SE_26537 | chr1:19725748-19729360 | Esophagus | | SE_31164 | chr1:19727698-19729374 | Fetal_Thymus | | SE_31447 | chr1:19728502-19729355 | Gastric | | SE_42185 | chr1:19728376-19729307 | Lung | | SE_45720 | chr1:19723558-19729015 | Osteoblasts | | SE_46635 | chr1:19727710-19729284 | Ovary | | SE_50058 | chr1:19726388-19729383 | Sigmoid_Colon | | SE_52345 | chr1:19727683-19729384 | Small_Intestine | | SE_54550 | chr1:19726107-19728569 | Stomach_Smooth_Muscle | | SE_65446 | chr1:19728630-19729569 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I019397 | chr1 | 19723770 | 19729243 |
|
Enhancer Sequence | GGAAAGCTTT GCAAAGCCCA GGGAGCATCA GCATCGGCAA ATCTCCCCTT GGTCTCCGGA 60
ATGGAAAGAA TGTGGAAACC AATGGGTGAT CAAGGAGTTC GAATTTTGCC TGACACTCTT 120
GCTGGGAATG AAGCATGCAG TCCTGTCTTT TGCCACCTTT TCAGCAGCCT CAGGTGAGCC 180
TTTTAAAAAG GTGAAAAACG AAGGACCACC TAGCCTGGGA GAAGCCAGGG TGGATCCTCT 240
CCTTCCTAGG GTGCTTCCTG CAGATGGCAC ACAGCCAAAG CTCTTCTGGT GTTTTAAGGC 300
AGAAACAGAA TTCAGGGGAG GACTAAACAA CCCCTTTAGA GCTACGTGCT GTGTTTTTTG 360
TTTGCATTTT TCCAAGTCCA GGCATTTTTC CAGGTATTTC CAATGAGACT GAAATGGCCT 420
ACACATAGGC TGACGACCTA TAATAACATA AGAAAGTGAT GTTGGCCCCC TGCTCCACCC 480
AGAGGGGACA TCTGCTTATT TGGCTTCCAG GTGGTGGGAG CAGTGGTTTT CCCCAAACAG 540
CTAATACCCT TCAATTCTTT GCTTTCTGTA TCATGAAGTT CACTGGAGTT TGGAGCACAG 600
ACTCTTTAAA CCAGTAATTT AACTCTACTT TTGAGGATAC CCTATGCCCC CAGCAGTTAT 660
GAGAAGGGTT GCCAAATCTT AACTCATAAG GGTGACAGGA TCAGGAACAA AGGCCTGGAC 720
TCTCCACCCT TCTCCTCTGC CAAAATCTAC GAGTTCAGGA AAATGGCAAG CCAGGAGTTT 780
ACTTTAGGTT CCCTCAAGAG CAGCAGCTGT TCCCACCAGG GCTGCGAAGG AATCAACAGG 840
AACTGAGAGA ACACCTGAAT GGTCTGATTC AGAAAGTCCC AGCTCCCTGT GAGGTCAATA 900
AAGAACTTTG TCTCAACAGA GGCAACAAGG CCACTGCCTC CTAGGAAAGG ACTGATGTGG 960
GCTTTTCTAG AGGCAGGCAG GCTCTTGGAT CAACAGGCTT ACAAGGGCAC ATTTCTCAGT 1020
TACGATCTTA AAATTGCAGG GAACCTGCTG ATCTCTGTCC CTTACCCATC TAGAAAGTCT 1080
GAGTGGGAGC TAACAGCTGA TCCTCAGCAA AACCAGAGTG TGCGCCCATC ACCTGCTTTC 1140
TGGTAAGGGA CCCATGTGGC CTGAATCAAA ACTCAAAGCT CACTAGACAC CAATTCACAC 1200
GCTCTATCTA ATCAGGCAGA AACCCAGCTG CTCCTGCTCA GTCCCTGCCC AGCTAGTACC 1260
TTCCCACCAC CCACCAGCTG TATCTCAGGC TCTGCCCACT CTAAGCTTTC CCTGGGATTT 1320
GCCTGCCAAG GGTGGGCCAC GGTGTCCTCT GTGGTGCTCT GCAGTGCCCA TGTTCCTCAC 1380
ATCAGAAGCC TTGCATTCTG GCTGGGAGCG GTGGCTCACC TCTGTAATCC CAGCACTTTG 1440
GAAGGCCGAG 1450
|
