Tag | Content |
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EnhancerAtlas ID | HS059-00502 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:17239910-17241080 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Hnf4a | MA0114.3 | chr1:17239982-17239998 | GAGGTCCAAGTCCAGT | + | 6.07 | KLF5 | MA0599.1 | chr1:17240495-17240505 | GCCCCGCCCC | + | 6.02 |
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| Number of super-enhancer constituents: 66 | ID | Coordinate | Tissue/cell |
SE_01476 | chr1:17239966-17242069 | Adrenal_Gland | SE_02875 | chr1:17240618-17241434 | Astrocytes | SE_03430 | chr1:17239783-17240499 | Brain_Angular_Gyrus | SE_03430 | chr1:17240731-17242488 | Brain_Angular_Gyrus | SE_04111 | chr1:17237927-17240527 | Brain_Anterior_Caudate | SE_04111 | chr1:17240628-17242448 | Brain_Anterior_Caudate | SE_05172 | chr1:17237770-17246094 | Brain_Cingulate_Gyrus | SE_06210 | chr1:17237645-17245771 | Brain_Hippocampus_Middle | SE_07232 | chr1:17238080-17242647 | Brain_Hippocampus_Middle_150 | SE_08076 | chr1:17237896-17246252 | Brain_Inferior_Temporal_Lobe | SE_08889 | chr1:17239947-17240454 | Brain_Mid_Frontal_Lobe | SE_08889 | chr1:17240789-17242026 | Brain_Mid_Frontal_Lobe | SE_10448 | chr1:17239853-17240476 | CD19_Primary | SE_11024 | chr1:17237883-17245307 | CD20 | SE_12131 | chr1:17240859-17241779 | CD3 | SE_13570 | chr1:17240617-17241484 | CD34_Primary_RO01536 | SE_14531 | chr1:17239563-17241985 | CD4_Memory_Primary_7pool | SE_15440 | chr1:17239829-17241939 | CD4_Memory_Primary_8pool | SE_15839 | chr1:17240568-17241687 | CD4_Naive_Primary_7pool | SE_16401 | chr1:17239578-17241745 | CD4_Naive_Primary_8pool | SE_17223 | chr1:17239936-17240632 | CD4p_CD225int_CD127p_Tmem | SE_17223 | chr1:17240641-17241519 | CD4p_CD225int_CD127p_Tmem | SE_17702 | chr1:17238954-17242280 | CD4p_CD25-_CD45RAp_Naive | SE_18224 | chr1:17239283-17242338 | CD4p_CD25-_CD45ROp_Memory | SE_19865 | chr1:17239824-17242024 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20182 | chr1:17239788-17241910 | CD56 | SE_20877 | chr1:17239477-17241855 | CD8_Memory_7pool | SE_21501 | chr1:17239632-17241900 | CD8_Naive_7pool | SE_22012 | chr1:17239593-17241877 | CD8_Naive_8pool | SE_22656 | chr1:17239909-17240454 | CD8_primiary | SE_22656 | chr1:17240604-17241913 | CD8_primiary | SE_23911 | chr1:17239885-17240478 | Colon_Crypt_2 | SE_23911 | chr1:17240479-17241564 | Colon_Crypt_2 | SE_25305 | chr1:17239947-17241454 | Colon_Crypt_3 | SE_27153 | chr1:17239835-17242028 | Esophagus | SE_28353 | chr1:17239867-17240494 | Fetal_Intestine | SE_28353 | chr1:17240610-17241704 | Fetal_Intestine | SE_29508 | chr1:17239703-17240542 | Fetal_Intestine_Large | SE_29649 | chr1:17238840-17240515 | Fetal_Muscle | SE_29649 | chr1:17240656-17242112 | Fetal_Muscle | SE_31118 | chr1:17238627-17240491 | Fetal_Thymus | SE_31118 | chr1:17240712-17241947 | Fetal_Thymus | SE_31881 | chr1:17239819-17242135 | Gastric | SE_33013 | chr1:17239950-17240437 | H1 | SE_33013 | chr1:17240620-17241403 | H1 | SE_33540 | chr1:17239257-17245174 | H2171 | SE_35172 | chr1:17239807-17241711 | HeLa | SE_42843 | chr1:17239864-17243201 | Lung | SE_45444 | chr1:17239949-17240367 | NHLF | SE_47744 | chr1:17239961-17240545 | Pancreas | SE_47744 | chr1:17240549-17242006 | Pancreas | SE_51608 | chr1:17238813-17242145 | Skeletal_Muscle | SE_53155 | chr1:17238762-17240528 | Small_Intestine | SE_53155 | chr1:17240572-17241791 | Small_Intestine | SE_53544 | chr1:17238838-17241941 | Spleen | SE_54964 | chr1:17238808-17242458 | Stomach_Smooth_Muscle | SE_55554 | chr1:17240073-17240473 | Thymus | SE_55554 | chr1:17240575-17241458 | Thymus | SE_61917 | chr1:17221528-17256732 | Toledo | SE_63124 | chr1:17215209-17241689 | Tonsil | SE_63250 | chr1:17222916-17254487 | GLC16 | SE_63321 | chr1:17222804-17249569 | NCI-H82 | SE_65449 | chr1:17237943-17242529 | Pancreatic_islets | SE_67642 | chr1:17239816-17240437 | u87 | SE_67642 | chr1:17240556-17241577 | u87 | SE_68996 | chr1:17239943-17241712 | H9 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I016912 | chr1 | 17238896 | 17241927 |
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Enhancer Sequence | TGGGCAATAG AGCAAGACTC CCTCAAAAAA AAAAAAAAGC ATGATTTCAT CCAATGCCTT 60 CAATAACAGA AGGAGGTCCA AGTCCAGTGA GAGGGTGGAA CGAACATACT GTCACAGTGG 120 AAAGGACACG AGACAGGCGC GCCACCGGGT TGAGTCTCGC GAACAAACTG AGGCCAGAGT 180 GCCTTCCCCA GGGCTGCACG TCAGTCAGGA AAAAAAAAAG CATTCTCTCC GACAGGTCAA 240 ATCACCGAAG CCTCGGGATC GTCGCTGGGG GCTGTGACGG GGCTGGCATG AAACGTCCCT 300 CTGTCTGGCT GGGCGATGGG TCAGTGCTCA GGAGTTTCAG GCCTTTAAGG CCCGGCCAGA 360 CCGCAGGGGG ACTCTGCAGC CGGGTCGGGG TTTCGATCCT GCGCTGCGGC CTTGCAACTG 420 CGAGGACTTG GGGGTCGTGC TTCGTTCGCC TGGTATCCTC GTTCGTGCGT GTAGGAGGCG 480 CCTGGCTTGC CGGGCGGTGC CAGGCGGCAA GAGGGAGGGC GCACGGAGCG TGTCCGCCCA 540 GGGCGGCCCC TGTAAGCGCT GCAGAAGCGC TGCTCCCGGC GCCCGGCCCC GCCCCAGCCT 600 CCGCCCCACT ACCGCGCAGC GCAGGCTCCG CCCCCAGTTT TCCCCGCCCC GTGGCGGGGA 660 CGCCCCGCCC GGTCCGGCCC GCTCGGCCTC GGCAGCAGCG GCTGCGGCGA AGGCGCGCGA 720 AGGTAGGTGG CCGGGGGCGC GCGCGTGCGC GGGGGCGGGA CGGACGCGCT CCCGGCGGAG 780 GAGGCCGCGC GCCTGGGGGC GGGCTGGAGC CACGTACCGG GGCTGGGGGC GCTGTGTGTT 840 CCGCGACTGC CGCGGCCCGG CACCGGAGGC CAGGAGAGCG TTCCCAACAG GCTCCGCGGA 900 TGCCCCGCCG CGTCCTGCCG CCCATCCTGC CCGGATTGTC GCGGGCCGGG GGCACGACAG 960 GAGACTGGGG CCTGCAGGGC GCAGCCGTCC CTCCGCCGGC CGGGGTCCCC TCGCTCCGCG 1020 GGCGGCCGTG GGAGGCCCTC GCGACGGCCT CTGCCCCCCG CAGATGCCCT CTGCAGCTCC 1080 TGCGTGCGGG CCCCGCCCTG CACTGCCCTC CTCGTGTGGG ATCCGGTTTC GTCTTCATTG 1140 CAGCCCTGCC GAGTCGGAAG CATCTCCATT 1170
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