EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS059-00384

Organism

Homo sapiens

Tissue/cell

GM12878

Coordinate

chr1:12508250-12510830

dbSUPER

Number of super-enhancer constituents: 28
ID	Coordinate	Tissue/cell

SE_00009	chr1:12506389-12526105	Adipose_Nuclei
SE_01743	chr1:12507910-12508720	Aorta
SE_01743	chr1:12508791-12509347	Aorta
SE_01743	chr1:12509733-12511495	Aorta
SE_03005	chr1:12508205-12508805	Bladder
SE_03005	chr1:12508948-12509464	Bladder
SE_03005	chr1:12509717-12510109	Bladder
SE_15065	chr1:12506299-12515319	CD4_Memory_Primary_7pool
SE_20910	chr1:12506384-12515111	CD8_Memory_7pool
SE_26086	chr1:12506439-12510424	Duodenum_Smooth_Muscle
SE_26716	chr1:12506659-12513255	Esophagus
SE_28215	chr1:12507888-12510030	Fetal_Intestine
SE_29231	chr1:12507637-12510111	Fetal_Intestine_Large
SE_29871	chr1:12507739-12511538	Fetal_Muscle
SE_33776	chr1:12506505-12516452	HCC1954
SE_37319	chr1:12506164-12510707	HSMMtube
SE_39244	chr1:12508337-12510202	IMR90
SE_39882	chr1:12506572-12512625	K562
SE_41209	chr1:12508082-12512128	Left_Ventricle
SE_42647	chr1:12507839-12509412	Lung
SE_42647	chr1:12509663-12511484	Lung
SE_45864	chr1:12506318-12510756	Osteoblasts
SE_49026	chr1:12508155-12509308	Right_Atrium
SE_49026	chr1:12510064-12511360	Right_Atrium
SE_50544	chr1:12507931-12511360	Sigmoid_Colon
SE_51539	chr1:12506369-12511986	Skeletal_Muscle
SE_52815	chr1:12507938-12510555	Small_Intestine
SE_54847	chr1:12507468-12511742	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I012446

chr1

12506572

12511845

Enhancer Sequence

CATCAGGACT CTGCTTTTGA GAGCCTGTGT GTTTTCTTGG AGTTGAAATA AGTTATCTGC 60
CAAATCAGGC TTTATGGTGT GACCGCCATA GAGGGAATTT TTTTTCCTGC ATTATAATCT 120
ATCTCCTGGT TCAGTACTGA GGCACAAGCT ATTTATGCAA AAACCTTGTT AGAATGGCAA 180
AACAGGAGCT CTCATGGGGT GGGAAGGCAT ATTCCCCATG GCCAGTGCTA ACTGTATGGA 240
AACCTGTCTT CAGGCTTCCC TCTGCATGCT TCATGGGGTT TCAGCAACAG ACAAGTAGGG 300
GTCTGGCATT TTCAACATAA GCATACCCCC CTTCTGCCAA AAAGTCCTAC ACTGGGTCCT 360
AGCTGATGAA GAGCTGAAAG GCAGGACACA ATTCCATCCA CAGCTGGGCT TCAGGATTCA 420
TCCTTCCTTC ATAATTCTTT ATAATCAATG TAGAAAAACT ATAGGGAAAA TAGGATTTGA 480
CTAAGCCCCG ACTTCTCTAT GTTGAAGATC AGTTGTCTTG ATTCTACCTG TGTACATCCT 540
GCTTATTTCT GCGGTTTTTA CTTTATAGCA TACTCCACCA ATCCTTTTTA AGGAAAAAGC 600
AAAATCCTAT TATGGGAATG CTTCAAACCA CTCTGAGCTT CCAGATTAAT CTGAAACAGC 660
ATCTGAGTTC ACAACTGGGT CAGAGTTGCA GAATAGCAAG AGAAACTTGC CAGTTCAGCA 720
GGCGTGTGTC TTGGGTTAGT TAAGACAGCA GGACAGTCCT GAGGCCTGAC TTCCTTGCAT 780
GTGTTTCAAC CTTGGGTGCT GAGATAATTC TGGGTGGCTT TAGATAACTT TGTTTCTTAA 840
CTGAAAAAGG AGTGTCTGTT GCCTGATAAG TGTTTATCCG TGAAATAGCA ACATGGTGTG 900
CATCTTAGGG TAGGAGGGCT TTTAGATCTC CAGAGACCAG GAAAAAAAAA AAAGCAAGGT 960
CATTGGCTTA GGCATATTAC TGGAATTAGG ATGTCAGTCC CAACTTTAAA ATGCCTGTAT 1020
TGTTTTTATT CAGGGTCCCC TTTCTGGATT CCTCCCCTTT TTTTCTCTTT GCCTTAAGGG 1080
CTATACATAA TCCATAACCA AGTAGAACTG AAAACAGACA AAAGCACTCC TCTTCTAGTG 1140
GATAGAAATC TGGAATCCAG AAATGCTTCC TTCTTGCCAA ACCTCAACTT GTTCCGTGCC 1200
TTTTTTTTTT TTTTAAATGC CTCTTCCCAG CCTCCCCACC CTTTCGTGAT TTGGCTGAGT 1260
GAGGACTAGC TGTTTGGTTT GCCTTTTATC AACAATAGAT ATTCACTGCT TTTCAGGTCA 1320
CATTTTCCTT TAACTCTTCT CTGTTTATGA GTATCACAAA AGGGTTCTTC AACATCAAGG 1380
CAAAACTCAC ACTCAGAATA CTTTTTAACT GTGGATATTT TGACAGTATG AAACGGAAGT 1440
CAGTGGTGAA GACTTTCGTT TTGAAGTGAC TTAGGTCTTA CATGACTCAA AGATGGTTTT 1500
CCTAGTAGTA TACCAGCAGA GTTGAAAATG ACTCTGAAAT TGAAAGTCCC ATACTACTTC 1560
TAAGAAACTT GTAAAAAGTG TTGGCCAAAT GCTACACCAA ACATTTTGCA TTAATTATTC 1620
TCTTAACTCT TCAAAACAGT CCTTTGCAGG CCAGGCTCGG TGGCTTATGC CTGTAATCCT 1680
AGCACCTCGT GGGGCCGAGG TAGGCAGATC ACATGAAGCC AGGAGTTCAA GACCAACCTG 1740
GCCAACACGG TGAGACCCTG TCTCTACTAA AAATACAAAA ATTAGCCAGG CGTGGTGGCA 1800
CACAACTGTA ATCCCTGCTA CGGGAGGCTG AGGCATGAGA ACCGCTTGAA CCCAGGAGGT 1860
GGAGGTTGCA GTGAGCTGTG ATCGCACCAC TGCACTCCAG CCTGGGTAAC AGACTGAGAC 1920
TCAGCCAGCA AAAAAAAAGA GCAATCCCTT ACAGTAGAAA GTATGTGATT TTAGCAGATG 1980
GATAAACTGA GGTTCAGAGA AATTAAGCCT CTTCCACCAG CATGCGTGTT TGGTAACTGT 2040
CAGGGTAAGA TTTGATTCCT TTGCTCCTGC TTGTTTGACT ACATCGTGGC AACTCCCACA 2100
AAGTTCATGG CAGCCTTACT TAGAGGCACA ATAGATAGTT GGGTTTTCCA AATTTATGAG 2160
TTCAGACATA GCTTATTGCA GGCAATGCTG ATTAGAATTA GAGCTGTGCT GGTAGCTGAG 2220
GTTTGCAGCT GTACAACCTT GTATAGTCTC TGACTTGTGG TGGTTTAACT TACAATTTTT 2280
TGACTTGACG ATGACGTAAA AGCTATATGC ATTCAGTAGA AACTGTACTT CAGATTTTGA 2340
GTTTTGATCT TCCTGGGCTG GTGACATGTG ATCCGATTCT GTCGCAGTGC TGGGCACTAG 2400
GGCAGCCGCA GCTCCTAGTT AGCCACGTGA TCATGAAGAG GGAACAAATA CTCTACAGTG 2460
GGCCCTGCTG CCAGATGACT TCGCCCAGCT GTCAGCTAAT GTAAGTGTTC CGGGCATGTT 2520
TAGATATGTT AGGTGTATGA AATTCATTTT TACTTAAAGC CTTTTCAACT TAAAAATGGG 2580