Tag | Content |
---|
EnhancerAtlas ID | HS059-00366 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:12216960-12219380 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Atoh1 | MA0461.2 | chr1:12219251-12219261 | AACATATGTT | + | 6.02 | Atoh1 | MA0461.2 | chr1:12219251-12219261 | AACATATGTT | - | 6.02 | POU2F2 | MA0507.1 | chr1:12217582-12217595 | AAATGCAAATGAA | - | 6.59 | ZNF263 | MA0528.1 | chr1:12218151-12218172 | GGAGGAGGGACCAGATGAGGG | + | 6.05 | ZNF263 | MA0528.1 | chr1:12218148-12218169 | GGAGGAGGAGGGACCAGATGA | + | 6.09 | Zfx | MA0146.2 | chr1:12219343-12219357 | GAGGCCGAGGCGGG | - | 6.01 |
|
| Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
SE_09154 | chr1:12216608-12219526 | CD14 | SE_10696 | chr1:12217339-12218245 | CD19_Primary | SE_11902 | chr1:12217293-12219317 | CD3 | SE_14553 | chr1:12217317-12219351 | CD4_Memory_Primary_7pool | SE_15480 | chr1:12217134-12219543 | CD4_Memory_Primary_8pool | SE_16946 | chr1:12217270-12219306 | CD4p_CD225int_CD127p_Tmem | SE_17650 | chr1:12217885-12219425 | CD4p_CD25-_CD45RAp_Naive | SE_17827 | chr1:12216958-12219425 | CD4p_CD25-_CD45ROp_Memory | SE_18389 | chr1:12214624-12219782 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19117 | chr1:12214726-12219467 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20048 | chr1:12217202-12218407 | CD56 | SE_22347 | chr1:12217150-12218408 | CD8_primiary | SE_26251 | chr1:12217691-12218767 | Duodenum_Smooth_Muscle | SE_52522 | chr1:12218102-12219079 | Small_Intestine | SE_53313 | chr1:12217267-12219291 | Spleen | SE_55394 | chr1:12218677-12218989 | Thymus | SE_59216 | chr1:12197780-12224862 | Ly3 | SE_61096 | chr1:12184746-12245090 | HBL1 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I012156 | chr1 | 12217042 | 12224321 |
|
Enhancer Sequence | ATAAAAATAA AAAAGAATAG ACTGTTCAGT GACAGAACCA GGTATTTATG ATAAAGAATA 60 AAGGGATGGA CTGTTTGGCT GATGGTTTAG GAAAAACTGG CTCACTCTAT GGACAGAAAT 120 AAAGGTTAGT CTCCAGACTT TATACTCCAT ATACAGTCTC AGTGTATTAA AGACCTAGAC 180 ATGAGATGGA AAATTATAAA GCTAATGAAA GAAAAATATA AAAAAGTATC TTCATAACCT 240 ATGAGTAGCT CTACCTATAG GTCATGATGA TACTTTTCTA TATTTTCTTT CATTACCCAT 300 AAGTAGGGAA TTCAAATGCA ATTCAAATGG CGAAACATTG ATGGATTCCA TTGCATTAAA 360 ATTAAGAATT TTTTTGCCAA CAATAAAGGA CACCATCAGC AAGGATACCA AATAGGCGAC 420 AGAGTGGAGG AAGTATTTGT GATATCTAAA AATGACAAGG GATTGATATC TAGCGCATGC 480 AAGGAATTAT TGCAAAGCTA CAAGAAAAAG ACAGGAAATA ATAGAAATAT GGTCAAAGGA 540 TGTGAATAGG CAGTTCACAG AAGGGAAAAC CCAAATGACT AACAAGTAAT GAAGAGGTGC 600 TCAAACCCAC GGATATTCAG AGAAATGCAA ATGAAATGAC ACCGGGCTCC ACTTCACACC 660 CATCAGATCG GCCCAAATCA GAACATTGGC TAATCACGAG TGTGGGGGCA AGAGAGTGGT 720 AGAAACCCTA TAGTCCTGAC AGTGGTGGCA TCACTGGGGT GGTCATCCTG GAGAAATTCT 780 CTCTTTTCTT TTTTAAAAAC CAGCTTCTAC ATCAAGAACA CAGTCCTGGA GAAATTTCTG 840 GCAGTGTTAG TGAAATAGGT AAACAAATAC TCCCCGATCC AGCAGTCCTA CTCCAGAGAA 900 ATTCAAACAC CTGCAAACGC CACCACATGT TTTATAAGGA CACACTGATT GTTGGAGAGG 960 TGCAGAGGAG GATGAGAACA GGGATTGAGG AAAAAAATCA GGCCAGAGAG GAACCTTGTA 1020 CAGCAAGATC TGTGCAGTAT GATTCACTCA ACTCTCTGTA CCTGAGGTCC AAAATATGAG 1080 AGTGAGAGAG AAGTTACGAA AAAAAAAAAA AAAAAAAAGA TTCCATTCAG ACCCGCCCCC 1140 AAATTTTGAA ATACCTAAGG TTTATTGACA AAAAAGAGGA AGGGGGTGGG AGGAGGAGGG 1200 ACCAGATGAG GGGAATCACG TTCCTCCCCA GGCCAGAGTG GCCTTGTTTG TAAAGAGGAA 1260 AAGAGGGGAA CTCAGGGCCA GTGGGGAAAC TGAGGCCAGA GTTCATAGGA TATATGGTGG 1320 AAAGGCAGCT GTTGCTTATG TTTGAGACTT TGTCTAGAAA ATTGTGGTCC ACAGATGGCT 1380 CCAGCTGCTA CTTGGAGAGA CCAGTGAAAT GGGGAGGTTT TGGTGGGGTG TGGGTTTTGG 1440 AAAGTGGGGG TTGGGGAAGG GGGACAGAGA GTGGGTTTGG AGGGGTTACG GGTTGGGAGT 1500 TAGAAGTGGA GAGACCAGGA TCCTGGAAAG GGTAACACTC ACTTGGCAGG GCCACGATGA 1560 GGCTGAAAGA ATTGAAAAGA ATTGAAAGGG AGAATTGAAA GCCCTTTGAA AATACAAAGG 1620 GCTGTAAAAG GAAACCCACT GACAAGATCA AACGCCCCCC GCCCCGCTGC AGATGTGGGG 1680 ATTGGGACTC TCACACGCTG CTGGCAGGAG TGTCCAGGGT GCAGCCCCCT GAGAGGAATT 1740 TGGCAGGGCC CCGTGAAAAT GAAAACATGC AAACCCACGG CCTGCCACTG CCCAGCAGTT 1800 CTACTTTCCA GGTTTAAGAC CTTGAGAAAC ATTCAACCTT GGGCATTGGG AGACAGATGC 1860 AGGAACGCGC ATCTCAGTGT GTGCAGTGGA GCCAAAGTGC AAACACCCCA AAGGCCCATT 1920 CCAGGGGAGC GGGGCAGCAA GGTGTGAGAC AGGCACCGGG CAGGCGCAGC ACCGAGTAGC 1980 AGCAGCAGCA GGTAGAAACA ATAAGCGGAT CTGAACTCAT CAATATGGAA AGTTCTCAGA 2040 AACACAGCCG AGGGGAAAAA AGCAAGGGGC AGGACGGCGC ACCTGGTGTT TCATCGTTTG 2100 TGTAGATGTA GACGCGTGTA TCTAGAATAA CACTCTACAT TGGTGTGTGG AAGCAGAAAA 2160 CGGACTGGTG AGAAACACCA CAAACCCAGA GGAATTGCTC TTTTGGGGGC TGAATCAAGG 2220 GGACTACAAC TTTGGCTGGG TGTCAAGGAT TTCCATTTGA ATTATAAAAG TATTTGAAGC 2280 AAAAAATAAT CAACATATGT TTACTGAGAG CCTACTATTT TTTTTTAAAT ATCTAATTGA 2340 AGGCCGGGCG AGGTGGCTCA CGCCTGTAAT CCCAGCACTT TGGGAGGCCG AGGCGGGCGG 2400 ATCACGAGGT CAGGAGTTCG 2420
|