Tag | Content |
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EnhancerAtlas ID | HS057-00568 |
Organism | Homo sapiens |
Tissue/cell | Gliobla |
Coordinate | chr19:1854870-1856740 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr19:1856368-1856386 | TCATCCTTCCTCCCTGCC | - | 6.08 | EWSR1-FLI1 | MA0149.1 | chr19:1855390-1855408 | GGAAGACAGGCAGGAAAG | + | 6.43 | KLF5 | MA0599.1 | chr19:1855444-1855454 | GGGGCGGGGC | - | 6.02 | SP1 | MA0079.4 | chr19:1855422-1855437 | AGGGGGCGGGGTCTC | - | 6.27 | SP4 | MA0685.1 | chr19:1855420-1855437 | GGAGGGGGCGGGGTCTC | - | 6.4 | ZNF263 | MA0528.1 | chr19:1856360-1856381 | TTCTCATCTCATCCTTCCTCC | - | 6.11 |
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| Number of super-enhancer constituents: 30 | ID | Coordinate | Tissue/cell |
SE_05653 | chr19:1854545-1857986 | Brain_Cingulate_Gyrus | SE_12493 | chr19:1855142-1855377 | CD34_adult | SE_12493 | chr19:1855582-1855832 | CD34_adult | SE_12493 | chr19:1855977-1856280 | CD34_adult | SE_12493 | chr19:1856309-1856716 | CD34_adult | SE_12794 | chr19:1855785-1856406 | CD34_fetal | SE_12794 | chr19:1856478-1856737 | CD34_fetal | SE_15325 | chr19:1851179-1863643 | CD4_Memory_Primary_7pool | SE_17066 | chr19:1855162-1858408 | CD4p_CD225int_CD127p_Tmem | SE_18006 | chr19:1854567-1858438 | CD4p_CD25-_CD45ROp_Memory | SE_20207 | chr19:1854775-1857036 | CD56 | SE_20804 | chr19:1851994-1859364 | CD8_Memory_7pool | SE_22514 | chr19:1854652-1858255 | CD8_primiary | SE_23274 | chr19:1855536-1863748 | Colon_Crypt_1 | SE_23831 | chr19:1855456-1863700 | Colon_Crypt_2 | SE_24756 | chr19:1851482-1865735 | Colon_Crypt_3 | SE_27152 | chr19:1853176-1865991 | Esophagus | SE_34338 | chr19:1852133-1866086 | HCT-116 | SE_41602 | chr19:1854125-1856964 | LNCaP | SE_45211 | chr19:1855501-1858228 | NHLF | SE_50407 | chr19:1852750-1865843 | Sigmoid_Colon | SE_52963 | chr19:1854521-1862878 | Small_Intestine | SE_53592 | chr19:1853107-1866012 | Spleen | SE_57652 | chr19:1855522-1856323 | VACO_503 | SE_61842 | chr19:1851542-1865663 | Toledo | SE_68584 | chr19:1847293-1885536 | TC71 | SE_68585 | chr19:1847293-1885536 | TC71 | SE_68586 | chr19:1847293-1885536 | TC71 | SE_68587 | chr19:1847293-1885536 | TC71 | SE_69023 | chr19:1852746-1858528 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | GGCTGAGCTC TGGTGTGAGT TCAAAACATG GAGAAGCACA AAGAATACAA CCCTTACCCG 60 CCCCCCGGTG GCCCAACACG AGACCCTAAT AAATAATCCT CTTATTTCCT ACCAGCTCTT 120 AGAAAGGACT CTCCGGCGAG CCCAGAATCT GTTAACCGTA AGTAACCGCC GCAGACCCCC 180 AAGGCTGAAG CTCCCCAGGC CCTCGCAGCC TCTGGCCCCA GGCGGGACCC TGGCAGGGAT 240 TAGCAAAGGC CTCCCAGTGT CTGTCCCAGG CACAGGCACG CTCAGAAGGC ATGCTCGGCC 300 TTCAGGCTGT CCCTGCCCCC CACCCAGGGG CATGCAGGGG CCTCCATCTG TGCATGATCC 360 CCTCCTTTTC CAAATGACCA CCTGGGATGC AAAGGCTGGG TTAAGGGGGT ACAATCATGG 420 CAACCTCCCT AACCCTCCTG GCCCCTCCAC GAGCAAGGGG GCATGGGAGG AACCCGCAGG 480 CACAGTCAGT CTGGGCCCCG ATCTCGGGGT GTGGTTAGAT GGAAGACAGG CAGGAAAGCT 540 CACAGGGAGG GGAGGGGGCG GGGTCTCCCG GGAAGGGGCG GGGCCCGGCG GGCTGGACTC 600 GCCCCACCCC CACGGGACAG ATGGCGCTGG GCAGGGGCGG GCCACCACCC GGCCACTTCC 660 TCCACAGTCC CCTCCCACCG CCAAGGCCGG GCCTCGCCCA TCCTGCCCCT AACCAGCCGT 720 CACCATCTGG GCCTGCCTGT GCGCCTCCAG GCGGTGTGGG TCTTTGCTCT AGAACTGTGC 780 CACCCGACCC CTTCCTTTAG CCGGGGTCTC ACGCCCACAG CATGTGGCAT CGTGATGTCA 840 GCGTCTCCCC AGCAGATAGG GGTCTCCAAC GACTGGGGAG GGGCAGGTCA GTCCACCTCC 900 ACCCAGGGAC CGAAGCAGGA CAAAGGGCCC TGCATCCCCG AAGCTCCCAC CCTTTCGGGC 960 CCTGCACCAG GTACCCTGGA CCCTGGCATT CCGGGACGTT ATTCCCGTGA CACCCCAGGG 1020 TGGGTTGTGT GGATGGAGAC CGGATGTGCA TGCCCCTCGT GGCACTGGTT GGAGCCCTGA 1080 GTAGCAAAAG AGACGTCAGA ACCAACTCCC CTGAGTGGCC CCAAAGCCTA TTCTCAAGGA 1140 AGCCACAGCA GGGCCAGGAG GGTAGTCACC CGGTGGGTTA CAAACTGGGC AGCCCACGCC 1200 CAGCACTGGA GGTTGCTCTG GCCCTGGGAG CACTCCCACC GGTCCATGAA GAACTGCAGC 1260 CAGCCAGGGG CCTAGAAGGA CCCACAGCAG GGACCATGGT GAGGGGTACA GAGACGGCGG 1320 GAGGGGCACG GCCATGCTCA GGGTGACCGA GTGACATCTC TGCTCTAAGA TCAGGGGCTG 1380 CCCTGGGGAG CCCAGCTGAG GAGGGGCACG GGAGGGTGGA GGGGTCTGCC CACTGAGGGG 1440 CACCAGCGAT CACCCGTGAC CCAAGAAGAG CTGGAAGAAA AAACCTTCCC TTCTCATCTC 1500 ATCCTTCCTC CCTGCCACAC CCCGACACCC TCAGCAAAAC AAGACTGCAG ACAGAGACCA 1560 GCAGCCCCCC TCCCCAAGAG GTTGTGAATC CAGGCAGCTG GAGAGGGGGA GAGACCAGCT 1620 GTCACCAAGA CCAACAGTAG CCTCAAATCC CTGGGGCTGC CTGCTCCACA CCCCAAGTCT 1680 CCCCCAAGCA ACCCAGGATG CAGCTGGGGT CGCGGGTCCG CCCCAGCTGG GGGCCGTCTA 1740 CAACCCAAGC AAGAGGCGCA GAGCAGCCCT GGAAGGGACC CCACTCCCAT CTCAACCACT 1800 GGGCCCTGAC AGCTCCCAAG GGCCTCAGTC TGGGGACGGG GTCTGGCTGT GGGAGCGCGG 1860 CTGGAGCAGA 1870
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