EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS055-03983

Organism

Homo sapiens

Tissue/cell

FT33

Coordinate

chr19:48995650-48996950

Target genes

Number: 26
Name	Ensembl ID

PLA2G4C	ENSG00000105499
LIG1	ENSG00000105486
C19orf68	ENSG00000185453
CARD8	ENSG00000105483
ZNF114	ENSG00000178150
CCDC114	ENSG00000105479
EMP3	ENSG00000142227
TMEM143	ENSG00000161558
SYNGR4	ENSG00000105467
KDELR1	ENSG00000105438
GRWD1	ENSG00000105447
KCNJ14	ENSG00000182324
CYTH2	ENSG00000105443
RPL18	ENSG00000063177
DBP	ENSG00000105516
AC008888.7	ENSG00000232871
CA11	ENSG00000063180
MAMSTR	ENSG00000176909
RASIP1	ENSG00000105538
IZUMO1	ENSG00000182264
FUT1	ENSG00000174951
HSD17B14	ENSG00000087076
PLEKHA4	ENSG00000105559
PPP1R15A	ENSG00000087074
TULP2	ENSG00000104804
NUCB1	ENSG00000104805

TF binding sites/motifs

Number: 19

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr19:48996445-48996456	GCCCCGCCCCC	+	6.02
KLF16	MA0741.1	chr19:48996104-48996115	ACCACGCCCCC	+	6.14
KLF5	MA0599.1	chr19:48996445-48996455	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr19:48996526-48996536	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr19:48996612-48996622	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr19:48996633-48996643	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr19:48996645-48996655	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr19:48996778-48996788	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr19:48996811-48996821	GCCCCGCCCC	+	6.02
Klf12	MA0742.1	chr19:48996744-48996759	GGCCACGCCCCACTC	+	6.02
Nr2f6(var.2)	MA0728.1	chr19:48995662-48995677	CGAACTCTTGACCTC	-	6.24
SP1	MA0079.4	chr19:48996442-48996457	CAGGCCCCGCCCCCG	+	6.11
SP1	MA0079.4	chr19:48996101-48996116	TAGACCACGCCCCCG	+	6.29
SP2	MA0516.2	chr19:48996229-48996246	CCTAGTCCCGCCCCATT	+	6.08
SP4	MA0685.1	chr19:48996742-48996759	CAGGCCACGCCCCACTC	+	6.08
SP4	MA0685.1	chr19:48996101-48996118	TAGACCACGCCCCCGTC	+	6.33
SP4	MA0685.1	chr19:48996442-48996459	CAGGCCCCGCCCCCGCT	+	6.35
Zfx	MA0146.2	chr19:48995687-48995701	CCCGCCTCGGCCTC	+	6.01
Zfx	MA0146.2	chr19:48996442-48996456	CAGGCCCCGCCCCC	-	6.19

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_34585	chr19:48994657-48998131	HCT-116
SE_65829	chr19:48995676-48998227	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I048489

chr19

48992929

48998057

Enhancer Sequence

CTAGGCTGGT CTCGAACTCT TGACCTCAAG TGATCCTCCC GCCTCGGCCT CCCAAAGTGC 60
TGGGATTACA GGCGTGAGCC ACCCGGGACA GGCCTAACTC TTAACACATT CCTCAACCCA 120
TCTCTCTAAA GACCCGTCCC AGTCGTTAGG TTCGCTCATC CCTGACCTCA CCCCAGAATA 180
CGTTAAGACT GCCTGCTCCA TCTCTGAAGC CCACCTGCAG CCTAGCCATG GCCCTTCCCT 240
AGTGGGTAAG ATCTGCTCCA ACCCGAACCA GCCTACAGAC ACTAGAACTC TAGTCAACAA 300
ACCATGCCCA AACTCTCACT AGGCCCCTTC ACCATCCAGG CCTCTTCTCA ACACTTCCTC 360
CCTAGCCTCT CCAGGATCCC ATACTTGACT ACCCAGTACC CCCTCTTTCC TTCCAGACCC 420
ACACTCTCTC TCCAGACCTC TCCTCGCCCT CTAGACCACG CCCCCGTCAC AAGCCCTGCC 480
CTCACCCTAG GTCCCGCCCC AGCTCTAGGC TCGGCCCATA CTCCTGGCCC TGCCCCATTG 540
CCAGGCCCTG CCCTCACACT CAAAGCCTCC TCCCATCTTC CTAGTCCCGC CCCATTTCCC 600
TGACCAGTCT CTCCCCAGAC CCCGCCTTCA CCCCTCAGGC CCTTCCCGCG CCCTGCTCCA 660
TCCGCCCCGC CCTAGGCTCC GCCCCCATTC CAGCCTTGGA TTTTCTCCAG GCCTCCTCTT 720
GCCGCGCCAC AGACTTGGCC TCCCTCAGGC CCGGATCCAG ACTCTGTCCC GATCCTAGGC 780
GCGGTCTCCT TCCAGGCCCC GCCCCCGCTC TAGGCTCAGC CTGCCTTCAA ACCCTGCTGT 840
AGACCCCGCC CCACCCTAAG CTCAGCCTTC GTCTAGGCCC CGCCCCAGGC CCTGCACCTC 900
TAGGCTCGAC CTCCCTCCAG GCCCCGCCCT GGGCTCCGCC CCCCAGCCCG CCCTCTCCCT 960
GGGCCCCGCC CCACTCTAGC TCGGCCCCGC CCCAGGCCCC GCCCCACTCT AGATTGGGGC 1020
TCCCCTTAGG TCCCACCCCA ATTCAGCTTG CCCTCCCTCC AGGCCCCGCA TCACTCCAGC 1080
TCGGCCTCCC TTCAGGCCAC GCCCCACTCT AACTCGGCCT CCCTCCAGGC CCCGCCCCAC 1140
CCTAGCTCGG CCTCCCTTCA GGCCCCGCCC CACTCCAGCT CCGCCTCCCT CCAGGCCCCG 1200
CCCAACTCTA AGCTCGGCCT CCCGCCAGGC CCTTCCCGGC TCTAGGCTCC TGCTCCCTCC 1260
AGGCCGCGAC CCCGAAACCG CGCCCTCTCG GGTTCCGCAC 1300