EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS053-00160

Organism

Homo sapiens

Tissue/cell

Foreskin_keratinocyte

Coordinate

chr1:8100100-8101590

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr1:8101175-8101196

TCTTTCTTTCTTTTTTTGTTT

6.13

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_01874	chr1:8099666-8101052	Aorta
SE_26425	chr1:8099767-8101609	Duodenum_Smooth_Muscle
SE_33765	chr1:8099879-8101573	HCC1954
SE_34231	chr1:8099554-8102426	HCT-116
SE_34846	chr1:8099891-8101213	HeLa
SE_36931	chr1:8099699-8101977	HSMMtube
SE_45858	chr1:8099933-8101698	Osteoblasts
SE_47106	chr1:8099395-8101831	Panc1
SE_51696	chr1:8100193-8101440	Skeletal_Muscle_Myoblast
SE_52775	chr1:8100403-8100987	Small_Intestine
SE_54897	chr1:8099700-8101657	Stomach_Smooth_Muscle
SE_55872	chr1:8098984-8102769	u87
SE_63484	chr1:8100182-8101259	HSMM
SE_67534	chr1:8098984-8102769	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I008039

chr1

8099908

8101624

Enhancer Sequence

GACTAGGAAA AAAAGGAAAT GGATATTGTC AGCATACATC AAGTGTCCAC AACAGCCATT 60
TTCTTATGTA CAGCATTTGA CTCTGTTCAC TTACAAATTT CTTAAAGTTT TCTGTTCTTT 120
GACCTCGGTA ACACTACACG TCACACCTTT TGATACCTCT CCTCAGTCCT GCTCGGTCAT 180
TTATTCTTCT CTTCCTTGTA TGCTTAGATG TTGGCGTCTT CGAGGCTTTC TTTACTTATT 240
CCTTAGTTTA GTCATCTCAT TCTATTCCTG AGCTTTTATT ATGATGTCTA TGTAAATTAC 300
ACCAAAATCT AATTGTAGTC CCATTTTCTC TCCTGGCCTG TAGTCCCTTT TTTTTTTTTC 360
TCCTGGCCTT TAATCCCATA TTTTTAATTT CTTACCAGTG CATCTCTCCT GGATATTTGT 420
TGCAGACTGG CTTCTTGGCA AGCAGTCTTT GAGATGGAGA TGAACATGGA GGACATTTAT 480
TAGAGTGTTG AAGGAAGGGT GAGGAAAAAG AATTGGGCAG AGGGAGAAGT TAAGTTGTGA 540
TCCATGTACG ACATAGGCCT TAGCTAACTA CATGCAAAGC TCTGGAACAG GATTGACCCT 600
TTGGAGTTGT CCTAACTTGG GCAAGAGAGC TGGACCTTTT TTCCTCTAAC TCTTATTGGT 660
CAGTCATTGA TATGGCTTGC CTTTGGAAGG AAGAGTAAGC TTGGAAAAGG CAGTTTTCTT 720
CAGCTGAGTC ACTCTCCAAA CAGGGTTGAC AGCTAAGGGC CATGTTCTGG CAGCATTCCC 780
AGGAGCTTGA GGAATAAGGC TTTTCATAAC TCATTGGGGA TCTGGGTAGC TCATCATGGA 840
AACTTCCTTT TGTTCTCTCT GTTGTTAGTT TATCCTTCCT CACTCCATTT TCCTAGTAGT 900
TTTGTTGATG TTTCTACTTT GATATTTTGA GGCTATATTA TTCAGAGCAT ACATGTTTAG 960
AATTGTTAAA TCTGTCTGAT AAATCCAACA TTTTGTTAAT TTGTAGTAAG CCTCTATCTC 1020
TAGTAATAAT TTTTGCATTA AAGTCTATTT TGTTTGATAC TTCTTTTCTT TACTTTCTTT 1080
CTTTCTTTTT TTGTTTTGTC TTGTTTTGTT TTGGGACAAA GTCTCACTCT GTGGCTTAGG 1140
CTGGACTGCA GTGGCATGAT CTTAGCTCAC TGTAACCTAT ACCTCCTGGG TTTAAGCGAT 1200
TCTTGTGTCT CAGCCATCTG AGTATCTGGG ATTACAGGTG TGTGCCACCA TGCCCAGCTA 1260
ATTTTTTGTA TTTTTAGTAG AGACAGAGTT TTGCCATGTT GGCCAGGCTG GTCTCAAACT 1320
CCTGGTCTTG AGTGATCTGC TTGCCTCAGC CTCCCAAAGT GATGGGATTA TAGGCGTGAG 1380
AGACCACGCC TGGCCTGTTT GATATTTCTG GAGTCACAAT GGCTTTCTTT TGGTTAGTAC 1440
TTTGGTGTAT TTTTTTCTAA AATTTTCTTT TTACTCTTTG GGTGTCCTTA 1490