Tag | Content |
---|
EnhancerAtlas ID | HS052-23808 |
Organism | Homo sapiens |
Tissue/cell | Fibroblast_foreskin |
Coordinate | chr20:49262420-49263640 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Lhx3 | MA0135.1 | chr20:49263362-49263375 | TATTAATTAATTT | - | 6.37 | POU6F1 | MA0628.1 | chr20:49263363-49263373 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr20:49263363-49263373 | ATTAATTAAT | - | 6.02 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_32007 | chr20:49261600-49263287 | Gastric | SE_32007 | chr20:49263382-49264022 | Gastric | SE_35012 | chr20:49260644-49264191 | HeLa | SE_39258 | chr20:49261463-49264119 | IMR90 | SE_43452 | chr20:49261575-49263676 | MCF-7 | SE_47109 | chr20:49244034-49267146 | Panc1 | SE_56235 | chr20:49261354-49263649 | u87 | SE_61673 | chr20:49240617-49282857 | Toledo |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I050641 | chr20 | 49257962 | 49264119 |
|
Enhancer Sequence | GAGGTAAACA ATTTACAAGA GACACATCAA GCCGGCCTGC TGTTCTGGTT TTTCTTTTGA 60 CAGTGAAATA TGCAGTTTCT TTTTCATCCT GGTGCCTATT GGAGAGGGAG ACTGTTCCAG 120 GCACTCTGAC CCCAGCTAAA GCGCCTCCCT GGGGCAGGAT CTATGCAGGG AGGCAGAAAA 180 GTCAGATTTT TTTTCACATC TTCTTTGTTC CATTCCCAGG ACTGAGCAAC TTCATGTATT 240 TATGTATTTA TTTATTTATT TATAGACAGG TTCTCACTAT GTCGCCCAGG CTGGAGTGCA 300 GTGGTGCGGT CACAGCTCAC TGCAACCTCA ATGTCCTAGG CTCCAGTGAT CCTCCTGCCT 360 CAGCCTCCTG AGTAGCCGGG ACCATAGGTG TGTACCACCA TGCCAGGGGA ATTTTTGTAT 420 CTTTGGTTAG AGAAAGGGTT TTGCTGTGAT GTTGCCCAGT CTGGTCTCAA ACTCCTGAGC 480 TCAAGCGATT CACCCTCCTG GGCCTCCCAA AGTGCTGGGA TTACAGGTGG GAGCCACTGT 540 GCGTGGCCCA GGACTGAGCA ACTTTAAGTC AGATGGTTAA CCTACATCAT GAGGAAAGTG 600 GATTTCCTCC CAAAGGAACA GACTTATTTT CTAGAACCCA AAGCCTTGAA TTTCAAGAAC 660 CTTTAGCCTT AAATCCATTT CCTGTTGGAA GCAGACCCCC TCCTGGTCTC CCCAGGTATT 720 GCAACCCTGC TCTACCAGCC ACTATAAATG CCCACACAAA AGGAACAGGG GCTCCATTCC 780 TGATGCTCAG AGTGGAGTCA CTAGATTCTC AAGCATATGA GATATGTATG TGGCCTAACA 840 GCCTGAAATA AACAGCTTGT GCTGGGATTG TAATTCTAGA GTTTCCAAAA GTGTTGCAAA 900 ATATTCCAGG CAGACACTAA AGTTTGTGTA CTACAAGCTG TTTATTAATT AATTTCTTAT 960 TTGCCAAACA TTCTTGCTTG GGTCTACTGG GAGATGATTT CGTTGGGAAT GCATCTCCAA 1020 TTTTGTAATA AAGATCACCA GGGAAAGAAG GCTTGCTTCA TAGGGGCTCA TATTACAGGA 1080 AATGTGGCTA GCATAGGTAG TTCCCATAAG AAAAAGGACA GTACTAAGTT TTGAGCTCAT 1140 GTGAAAAAGA AAAGGGGGCC GGGCGTGGTG GCTCACACCT GTAATCCGCA CTTTCGGAGG 1200 CCGAGGCGGA CGGATCACTT 1220
|