EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS052-08221 
Organism
Homo sapiens 
Tissue/cell
Fibroblast_foreskin 
Coordinate
chr12:12885870-12891100 
SNPs
Number: 3             
IDChromosomePositionGenome Version
rs2024385chr1212888438hg19
rs4763297chr1212889289hg19
rs11055034chr1212890626hg19
TF binding sites/motifs
Number: 8             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr12:12888364-12888382GGAGGAAAGGAAGGAGAG+6.42
EWSR1-FLI1MA0149.1chr12:12888360-12888378GAAAGGAGGAAAGGAAGG+7.13
FOXF2MA0030.1chr12:12889639-12889653TTAACATAAACAAT+6.03
Foxd3MA0041.1chr12:12888160-12888172AAACAAACAAAC-6.32
Foxd3MA0041.1chr12:12888164-12888176AAACAAACAAAC-6.32
TEAD1MA0090.2chr12:12887533-12887543CACATTCCAT+6.02
ZNF263MA0528.1chr12:12890533-12890554CCTCTCCTCCTCCCCTTCTCC-6.17
ZNF263MA0528.1chr12:12888361-12888382AAAGGAGGAAAGGAAGGAGAG+7.21
Number of super-enhancer constituents: 63             
IDCoordinateTissue/cell
SE_02384chr12:12886698-12888763Astrocytes
SE_02384chr12:12889367-12891080Astrocytes
SE_04457chr12:12889399-12890487Brain_Anterior_Caudate
SE_05723chr12:12889250-12890996Brain_Cingulate_Gyrus
SE_06515chr12:12887038-12888754Brain_Hippocampus_Middle
SE_06515chr12:12889295-12890622Brain_Hippocampus_Middle
SE_07055chr12:12889264-12890612Brain_Hippocampus_Middle_150
SE_09887chr12:12889463-12890550CD14
SE_10399chr12:12889466-12890156CD19_Primary
SE_11298chr12:12885661-12889102CD20
SE_11298chr12:12889288-12891024CD20
SE_11994chr12:12889317-12890964CD3
SE_13418chr12:12887480-12888283CD34_Primary_RO01536
SE_13418chr12:12889451-12890667CD34_Primary_RO01536
SE_14411chr12:12887526-12888462CD4_Memory_Primary_7pool
SE_14411chr12:12889291-12890783CD4_Memory_Primary_7pool
SE_15395chr12:12889422-12890889CD4_Memory_Primary_8pool
SE_16327chr12:12889289-12890803CD4_Naive_Primary_8pool
SE_16955chr12:12889358-12890444CD4p_CD225int_CD127p_Tmem
SE_17376chr12:12886958-12888746CD4p_CD25-_CD45RAp_Naive
SE_17376chr12:12889323-12890851CD4p_CD25-_CD45RAp_Naive
SE_19332chr12:12887435-12888636CD4p_CD25-_Il17p_PMAstim_Th17
SE_19332chr12:12889413-12891128CD4p_CD25-_Il17p_PMAstim_Th17
SE_20110chr12:12887564-12889287CD56
SE_20110chr12:12889323-12891107CD56
SE_20780chr12:12889241-12890995CD8_Memory_7pool
SE_21484chr12:12889406-12890424CD8_Naive_7pool
SE_21956chr12:12889267-12891152CD8_Naive_8pool
SE_23308chr12:12887512-12888433Colon_Crypt_1
SE_24059chr12:12887556-12888566Colon_Crypt_2
SE_25539chr12:12889286-12890978DND41
SE_25894chr12:12886864-12888404Duodenum_Smooth_Muscle
SE_25894chr12:12889266-12890640Duodenum_Smooth_Muscle
SE_26782chr12:12889510-12890129Esophagus
SE_27782chr12:12889424-12890846Fetal_Intestine
SE_31002chr12:12889358-12890247Fetal_Thymus
SE_32681chr12:12889248-12890518GM12878
SE_34820chr12:12889520-12891049HeLa
SE_40553chr12:12887598-12888269K562
SE_41095chr12:12887480-12888271Left_Ventricle
SE_42460chr12:12887484-12888622Lung
SE_42460chr12:12889585-12890140Lung
SE_44374chr12:12886694-12888835NHDF-Ad
SE_44374chr12:12889461-12890977NHDF-Ad
SE_44929chr12:12887293-12888598NHLF
SE_44929chr12:12889526-12890707NHLF
SE_45697chr12:12885461-12889249Osteoblasts
SE_45697chr12:12889295-12892730Osteoblasts
SE_47372chr12:12886284-12889123Panc1
SE_47372chr12:12889267-12891175Panc1
SE_47808chr12:12887675-12888279Pancreas
SE_50256chr12:12887409-12888767Sigmoid_Colon
SE_50256chr12:12889478-12890056Sigmoid_Colon
SE_52464chr12:12887095-12888693Small_Intestine
SE_52464chr12:12889382-12890237Small_Intestine
SE_53337chr12:12887047-12888706Spleen
SE_53337chr12:12889493-12890332Spleen
SE_56035chr12:12889371-12890742u87
SE_61268chr12:12866751-12890857HBL1
SE_61621chr12:12866181-12890888Toledo
SE_62220chr12:12864939-12895381Tonsil
SE_66441chr12:12889534-12890218Jurkat
SE_67164chr12:12889427-12890439MM1S
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr121288973212889911
Number: 1             
IDChromosomeStartEnd
GH12I012733chr121288605512890944
Enhancer Sequence
TGATTGAACT AACCATAGTA TATGCAAGAA GGGTACAAAT TATAGCCATT AAAACACCCT 60
GGGTAGCTTT ATATGTATTA ACAGTTATAT ATCTTGGCTG GGCAGGGTGG CTCATGCCTG 120
TAATCCCAGC ACTTTGGGAG ACCGAGAGAG GCAGATGGAT AAAGCCCAGG AGTTTGAGAC 180
CAGCCTGGGC AACGTGGTGA AACTCCATCT CTACAAAAAA CACCAAAAAA AAAAAAAAAA 240
TTAGCTGGAT ATGGTGGCAC AGGCCTGTAG TCACAGCTAC TCAGAAGGTT GAGGTAGGAG 300
GATCACCTAA GAAAGGAGGT CTAGACTGCA GTGAGCTGTG ATCACGCCAC TGCACTCCAG 360
CCTGGGTGGC AGAACAAGAC TGTCTCAAAA AAAAAAAAGT TATATGGCTT AATGTTAAAG 420
TTTCCATAGC ACATTAAGAC CAAAAGCAGG CACAGAACAG TATCTATGGT ATGAATGTAT 480
TTTTGTGAAA AATTTAAAAA TTCACATGTA TATAGGCATA CAATTGAAGG TTACCCACCA 540
CATTAACATC TGTAGTTCCT ATTTCTGAGG GCAGGATTAT GAAGAGACTT TCCCTTAAAC 600
ATTTATGTAC TGTTTGCATT TTTAACAGTA GATTTTAACA AGGAAAAAAC CATGAAGGTA 660
TTTCAATTTT TTTTCTTTTT TTTTGAGACA GAGTTTCGCT CTGTTGCCGA GGCTAGAGTG 720
CAGTGGCACG ATCTCGGCTC ACTGCAACCT TCGCCTCCTG GGTTCAAGCA ATTCTCCTGC 780
CTCAGCCTCC TGAGTAGCTG GGATTACAGA TGAGTGCCAC CACACCCAGC TAATTTTTTG 840
TATTTTTAGT AGAGACAGGG TTTCTCCATG TTGGCCAGGT TGATCTCAAA CTCCTGACCT 900
CAGGTGATCT GCCCTCCTCT GTCCCCCAAA GTGTTGGGAT TACAGGCGTG AGCCACCGCG 960
CCCAGCCGGT ATTTCAAATT TGAAATAATT ATTTTTACAA TTTCTTGAAC ATGGAATCAG 1020
AGTTTTTATG TCTCACATAC GGTCTCATTC TTTTCGGACA TTAGCAGAGC ACAAGGCATT 1080
TCTTTAATAA TTTTTCCTCC ATTTTTCTAT CTAACTTCAG ATGCCATTAA ATCTGTACAT 1140
GAGTTATGAG GAGTGTATGC ATGTTTGTGT ACATGGTTTG GCTTCTGGGG CACATAAATG 1200
AGGTATAAAT ATTATCCCCA TTAACTCAAG GATATCTTAA CAAACCATGG AAAATTGAGG 1260
TTATTCCATC TTTTTGCCAT ATGGGATTTT ACTGGTAACA TGATCCCAAA ACTCACATTC 1320
CTTGATCTTT GGCACTTGGC ACACTCAGGG AATCCGCCTG GGAATTCACC AGATCAACTC 1380
CCTGCCTTAG ATTAGTTACT TAGGACATAG TGCTGGGAAA ATAGTTTTAC ATTTCAAGTT 1440
AGCCGACTAA TCTTTGGCTG TCCCTCTCCA TGTGACTGAC CTGGGGCAAA TCTTAGAATC 1500
TCAGAATATT GGCTATGGGA GACCACTGTA TCGATTCTTT CCATTTTGCA GATGAGAATA 1560
TTCTAATTCT TGATTTCCTG TAAAGTGGGG AAGTTAAACG AAGATGATTT ATAGATTCCT 1620
TCTGGCTTAC AGCTCTGTGA TTCTTGTTTC CTAGTCAAGA TCACACATTC CATCCCTGTG 1680
GATCAGGTTA TTTTTCAGGG AAGCTAGAGT CCTGATTTTT GGCCACAAAC CACATATTCA 1740
GAATCAAAAG AAGATGATCT TATAATAGCG TAGGCTGAAC AATAAACGTT TATAATCTCA 1800
CTAGAAAAAA AGCACGTGAA TGTGTAACCT AATGGTTGCT TAGTAGTGCC AGATATTGCT 1860
GCATTGTCGC GTGCAGTCTC TGGGAGCCTT TACTAAGGCC AGGCTCTGTG GGCTTCAAGG 1920
TCACAAACAG GAGCGCTGGC CTCCTGGAGC TCCACAAGGC GTCACAGCTG TAATTATTCC 1980
ATGGAATTTA GGTGAGTGTT GTGAAGGATG AGTGCCATGA AGGGACCTCA GAGCTTCTGC 2040
TTCATGCTGT AGCAGTTTGG ATCCCAGACA AGGTGACTAA CTGAGGAAGC AAGCAGGGGC 2100
TAAAATCGAA ACTCTTTCCC CAAGCCAGCC TGTGTTTACT GAAAAGAAAA GGGCCTTTAA 2160
AAATCCACCA ACACTCCCTT TAGCTGAGCA GCCACTTATA GTCCCAGCTA CTCGGGAGTT 2220
TGAGGTGGAA GGATCCCTTG AGCCCAGGAG TTCCAGTCCA CCTGAGCAAC AGAACAAGAC 2280
CCCATCTCTA AAACAAACAA ACAAACAAAA TAAAAAATGC CATTCCATCC CCCTCACCTG 2340
CAGTGCCTTC CCCTATGTTC CAGTGGCTGC CTGTAGGATG CTGTAAGAGT TTGAAACAGG 2400
GGCCCTGACC TAGAGCGAGG GTTAGAGAAT CCCTCCTAAA GAAATGACTT TCAAGTTGAG 2460
ACCTGGAAGC TGAGCATGAG TTAACCAGTT GAAAGGAGGA AAGGAAGGAG AGTGAGCCAA 2520
GCAGAACACA GTCCAAGGCT GCAAGTCAGA GAAGAGCTTT GAAAGAATGT GCTTGTGGCT 2580
GGGGGGCAGT GAGCCAATGG CAGAAGGAAT GAGTGCTGTG GCTGGAGTGA TGGGCTTTTT 2640
AAGCCACATT AGGAATTTTG GACTTTAAGT GCAATGGGAA GCCACTGGAT AATTTAAAGG 2700
TGACTTGGCA GGCACAGTGG CTGATGCCTG CAATCTCAGT GCTTTGGGAG GCCAAAGTGG 2760
ATTGCTTGGG AGGCCGAAGA GGATCATTCG AGGTTAGGCA TCGAAGACCT GCCTGGACAA 2820
TGTGAGGCCT CATTTCTACA ATAAATAAAT AAATAAATAA ATAAGCCAGG CATGGTGGTG 2880
AGCACCTGTA GTCATACCTA CTTGGGAAGC TGAAGCAGGA GGATCGCTTG GGCCCAGGAA 2940
TTCACAGTTT TAGTGAGCTA TAATCCACCA CTGCCACTCA GGCCTGGGTG ACAGAGTGAG 3000
ATCTTGTCTC TAAACTAAAA TAAAATAAGC TCACACCTGT AATGTCAGCA CTTTGAGAAG 3060
CTGAGGCAGG TGGATCACTT GAACCCAGCC TGGGTACCAT GGCAAAACCC CATCTCTACT 3120
AAAAATACAA ACAACTAGGC TGGGAGCAGT GGTTCATGCC TGTAATCCCA GCATTTTGGG 3180
AGGCTGAGGC GGGTGGATCA CTCAGGAGTT CAAGACTGGC CTGGCCAGCC TGGTGAAACC 3240
CCGTCTCTAC TAAAAATACA AAAAATTAGG TGAGCGTGGT GGTGTGTGCC TGTAATCCCA 3300
GCTACTCGAG AGGCTGAGGC AGGAGAACTG CTTGAACCCA GGAGGAGGAG GTTGCGGTGA 3360
GCCAAGATCA CGCCACTGCA CTCCAGCCTG GGCAATAAGA GTGAGAGTCT GTCTCAAAAA 3420
AAACAAAACA AAACAAAAAA ACTAGCTGGG CATGGTGGTG TGCACCTGTA GTCCCAGCTA 3480
CTTGGGAGGC TGAGGTGGGA GAATCACCTG AGCCTGGGAG GTCAAGGCTA TAGTGAGCCA 3540
TGATCACGCC ACTGCACTCC AGCCTGGGTG ACAGACTGAG ACCCTGTCTC AAAAGAATAA 3600
ATAAATAAAA TAAAATAAGA GAGTGACTTG AGCAGCTTCA AATAAATTTT ATTGTTTCCT 3660
CACTTTATCT AATATTAATT GAAATCCTTA GTCTTATGTT GGGGTTATCC CAATAGGACG 3720
TGGGAAAGAA AGTTCAAGCT TTCGCCTTGA TAGTTCTCCA TGATGCTGCT TAACATAAAC 3780
AATCGAGTTT TCAAAAACCA AAACTCTTGA TTTCATTAAG TAAGGAGGGT GTAATGTGTA 3840
GTGCTTGGGC CGTTAGAGGG GATGTGGTCA CAAGTGGTAT ATCTGAGGCT TTTGAAGGAG 3900
TGCATTCAAG GAAGAGCCCT GCTTGGTGTC AGCTACTGAA CCAGAGATCC GAAGAAGTGG 3960
ACCTCGCCAG CCTCCTGCTC CACCCCGCTA CCAGTCTTAG CTGGAGCTCC CTTTTCTTTG 4020
TCATACTCAG CCAGTTGCTC ATTGCTGTTT TAGAGTCTGG CCCATGTTTT GCTCTTTGGC 4080
TGTGCGATTG GCGTGAATCT TCTAAGCAAA TGAATAGCTT AGAGGTGAAT ACTGAATCTT 4140
TTGCTTCAAG TAGCTCAGCA TTTTTGTCTT TCATTTTTAC TAAGTGACTA GATTCAGTAT 4200
TCGAAGATGT TTTGGCCAAA TGATTCATTA TTTATTTGGC TTTAGAAAGA GACTTCAAAA 4260
GGATAATAGA AATAAACAAC CCAGAGGTTT TTTTTTTAAA TTGAAGATTA ATAAAAGAGA 4320
GACCTCTGCT GGCTACAGTG GGGTAACAAC CTAGAGTTGG CCACTGACTC CACAGGAAGC 4380
TATAATGGCT GTGACCCACC CCATACGCTT TTACAGTTGT CAGCAAATTG ATCACTATTT 4440
GTTCACTTCT TCAGCAATCA ACTCAAGTTC TTTTGGAGTT CATTGAAGTG AGGTATAATT 4500
CCCAGTCCAA TCACCACTGT TTCTGTTTCA ATCTTTAGGA AAAGTATTAG TCTTTTATAT 4560
TTCTCGAACA TAATAGCTTT ACATATGAGC CCCTGCCAAA CTGAGACCTG AAATAATTCC 4620
TGCATCTTAC CTTCTCTGTT TCCTTTCCCC TTTTTTGCCT CCACCTCTCC TCCTCCCCTT 4680
CTCCAGTAAA ACAAAATAAA ACAAATCTAC ACTCAAGAGA GAGTACTGAT AGAAAGTGAG 4740
AAGGAGGGAG CTGGGCGCTT ATCTTTGGCA TATCCTCAGC TGAGGATCCA AGCTGGGGGG 4800
CCCAGGGTTG GTGTTAACTA CCTGAGTAGA GCTGTAGTTC CTACTGATGT CTTCCGTGGG 4860
ATTTGTTCAA CCGTGGGAAT GTGGCTGCAC GATAGTGGAG CAAGATTCAG TGAATGCTTC 4920
AGAATATGGA GGGTCGTTAT CTAGGGGGAG GAAGGGGACT GAATGTTCTC TTGAGACCTT 4980
TTGTTGGCAA CAACAATAAT GAGTGCCTAC TATGTGCCAG GCCCTGGACT AAGTACCTTA 5040
AATACCTTAA TTCTGTTTCC TGCTTTTCTT CTCTCTTCAC AGTCTTAAGA ATGTCTTTCT 5100
ATGAGAAAAA CATTGAATAT ATGTAAAGAA CTTACAACAA GGCCTGCATA AAGTAGTAGC 5160
TATGCATGTG TTCACTATTT TATTATTATG TTTTTACTCT GGAATATGCT GCCACTCCTA 5220
CACATGAGGA 5230