EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-28405

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chrX:49048620-49049720

Target genes

Number: 35
Name	Ensembl ID

WAS	ENSG00000015285
AC115617.2	ENSG00000233585
GATA1	ENSG00000102145
HDAC6	ENSG00000094631
PQBP1	ENSG00000102103
TIMM17B	ENSG00000126768
SLC35A2	ENSG00000102100
PIM2	ENSG00000102096
OTUD5	ENSG00000068308
U6	ENSG00000223309
GRIPAP1	ENSG00000068400
TFE3	ENSG00000068323
CCDC120	ENSG00000147144
PRAF2	ENSG00000243279
U4	ENSG00000206936
WDR45	ENSG00000196998
GPKOW	ENSG00000068394
MAGIX	ENSG00000017621
PLP2	ENSG00000102007
PRICKLE3	ENSG00000012211
SYP	ENSG00000237341
CACNA1F	ENSG00000102001
HSPB1P2	ENSG00000230216
CCDC22	ENSG00000101997
FOXP3	ENSG00000049768
PPP1R3F	ENSG00000049769
GAGE10	ENSG00000215274
GAGE13	ENSG00000237597
GAGE2D	ENSG00000240257
GAGE12I	ENSG00000241465
GAGE2C	ENSG00000236249
GAGE2B	ENSG00000231850
GAGE12C	ENSG00000237671
GAGE12E	ENSG00000216649
GAGE12F	ENSG00000236362

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chrX:49049379-49049398	CAGCCAGTAGGGGGCATCC	+	6.14
Zfx	MA0146.2	chrX:49048893-49048907	CCCGCCTCGGCCTC	+	6.01

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH0XI049188	chrX	49044793	49049057
GH0XI049192	chrX	49049281	49049450

Enhancer Sequence

ATAAGTGCAC ATGTATAAGA TATATGAAAC TTGCATAATT TTTTTTTTGA GATGGAGTTT 60
CGCTCTTGTT GCCCAGGCGG GAGTGCAATG GCACGATCTC GGCTCACCAC AACCTTCGCC 120
TCCCGGGTTC AAGCAATTCT CCTGCCTCAG CCTCCCGAGT AGCTGGGATT ACAGGCATGC 180
ACCACCACAC CAGCTAATTT TGTATTTTTA GTAGAGATGG GGTTTCTCCA TGTTGGTCAG 240
GCTGGTCTTG AACTCCCGAC CTCAGGTGAT CTGCCCGCCT CGGCCTCCCA TAGTGCTGGG 300
ATTACTGGCG TGAGCTACCG CACCCGGCCA CATAAAGTAA TTTTAAGACA TAAAACACTT 360
TCTGTACCTT TCCTTATATG CCAAGCCCTC TTCTAAGAGC TTTACATGTT ATAAGCTCAC 420
TTAAAATTCA GTTTTGGGCA GGAAATACTA TCTCCATTTT ACAGTTGAGG AAACTGAGGC 480
CCTAGAGGCT AAGTTACCTG AAGTCTCACA TCCAGCAAGT GACAGGAAAG AAAAGTTGTA 540
ATCTTAGCAT CTGTAACCCT TGTATACGAC TTACCTTGTG CCAGGCCCTT TTCTGAGCAC 600
TCCGTATTCT TAGTTCAATA AATACTCAAC TTTGGAGCAG GACCTATTAT TAGTCTTCGA 660
TTATGCATGC TCAACTGAAC CTTGAGAGGC TGTGACTAGT TTCAGGTCAG GGAGCTTGCA 720
AGAGGTAGAG CTGGGATTTG AGCGCAGACA GTCTGACTCC AGCCAGTAGG GGGCATCCAA 780
GTGGGGAAAC ATTTCAAGTT TTTCCTTCAT TTTGCACATG AGGAAACTGA GGTCCCAAGA 840
GGGTGCTGAG TTGCTTATTT TACATGTCTA GGCTGGGTCT GGGATCCAGG TCTCCCAAAC 900
CTGTCATGTT CCCCCTTTGG GGACAGTCTG TGGTGTCACA GTGGTTACAA TTGCTAGCTC 960
ATCCTTCAAC GTTGTTGTTG GCACGCGTTC TTCAGGGACA CCCCTTGGAT CTCCCCTGAC 1020
TCTCCTCTTA TTCTCCCACT CCACCACTCC CCATGCCGGA CTGTACTGTT TTCCACTCTC 1080
CCTCCTCCAG CCAGCACCCA 1100