Tag | Content |
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EnhancerAtlas ID | HS051-23674 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr6:52254050-52256080 |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF1A | MA0046.2 | chr6:52254495-52254510 | AGTTAATGTTTAATT | - | 6.56 | JUN(var.2) | MA0489.1 | chr6:52255377-52255391 | AGGAAGTGACTCAC | + | 6.15 | Lhx3 | MA0135.1 | chr6:52255573-52255586 | TAATAATTAATTT | - | 6.25 |
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| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_03340 | chr6:52253085-52255876 | Brain_Angular_Gyrus | SE_04214 | chr6:52253002-52256108 | Brain_Anterior_Caudate | SE_04963 | chr6:52250679-52259985 | Brain_Cingulate_Gyrus | SE_06207 | chr6:52251162-52257636 | Brain_Hippocampus_Middle | SE_06960 | chr6:52252878-52258020 | Brain_Hippocampus_Middle_150 | SE_08050 | chr6:52250972-52259364 | Brain_Inferior_Temporal_Lobe | SE_12385 | chr6:52253060-52257034 | CD3 | SE_16054 | chr6:52253695-52256439 | CD4_Naive_Primary_7pool | SE_17578 | chr6:52252868-52267051 | CD4p_CD25-_CD45RAp_Naive | SE_19089 | chr6:52252884-52266905 | CD4p_CD25-_Il17-_PMAstim_Th | SE_21851 | chr6:52253151-52257043 | CD8_Naive_7pool | SE_58572 | chr6:52147442-52265048 | Ly1 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr6 | 52254120 | 52254219 | chr6 | 52254281 | 52255602 | chr6 | 52255784 | 52255834 | chr6 | 52255964 | 52256018 |
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| Number: 1 | ID | Chromosome | Start | End |
GH06I052388 | chr6 | 52253119 | 52256859 |
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Enhancer Sequence | TCACTGGTTT TTACCTTTAG AAGCAGGCAA AGGATAGTCA TTCACTTTGT TTTTGAACAA 60 TGATCTATTG ACACATTCTG GGGACATCTT TCCTCTGACT GTTTGCTGAT AGAAATAAAG 120 CATAGGTAAG CCAGTGTTCC TGTCTCCAGA GGCTTGCAAT TCAATAAGCA GAAGAGAGAA 180 GGCTCTCTAC ACACACAGTA GTGAAGTAAT GGGCAAGCCT GATGTTCTCC TTACCAAAAT 240 ATGTGGAATA GATAGATAAG GGTTGGGGGC GGGGGAGGAA TCAAGATGGC CTGGAGAAGG 300 CTTTGTGGTG ATTTGGAATT GAACTAAGGC CTTGGAGATA TCTAAGGAGA AATGAAGAAT 360 AAAGTGACTT GCTTGACTCT TTATAGCAAA TAAAATTGCT GGGTCTTAGA ACCACCAGGA 420 GAGTGTACTG TTGTCACTGC AGAAGAGTTA ATGTTTAATT GCTAGGGAAC ACAGCTTTCT 480 TTATATGGTG CTCCAAACTC TAGCTCGATT TGTTATCTGA TTTTCTGCTG TGGAAAGGGC 540 ATTTCCAAGA TTGATTTCCT GCCAGTGGAA ATGAGCAGCT CTCTTCACGT TCACCCGGGT 600 TGGCCCGGGT CCCAGCTGGT TTGCAGATCA GTGATGAAGC TTCCTGCCGG TGAGAAGCTA 660 GATCTAGTTG AGAGGTTGCC TGACTGAAGC CAAACCACAC CTAACGAAGC CGATAGTTAC 720 ACTCATGTAG AAAGTCCAGG GAGACACCTG TCCCTAGGCT TTAATTAGTG GGAGTTTCAG 780 ACAGCAAAGT TTACCTTTAC TCAAACAAGA AGCCTCAGAA GAACATGATC TTCACACCTG 840 AACTGTTGAT TGCCTGGAGA CTGCTCAGTG TGTTCTCCCA GTAAATTGTT CCCAGCTCCT 900 CTGACTTCTC CCACTCGACA GATTAAACAC AGATACTATT TATTCCATGT GGCAGATGCA 960 TTCTCTGTCT GTAATGATGC ATTTTGAAAC CAGTACTTTC TCAAGTGAGA TTAGCTGAGA 1020 TGTGGAAAGT ATAGGAAGTG ACAGAACAGA CAGAAATTCT AGCTAGAGGG TTCTAGTTAG 1080 ATAAAGAGAA AAAGGCACTC AGAGGAAATT TGCTCTGCTC ATCTTTCCCA GGGCACAGCA 1140 ACAAATTAAG GCTGTCTTTT CTTTCTCCTC TTAGGAATAT TATAGGGCAC CACAGAGGAA 1200 AAGATTCATA AGTGGAGAGC TCACTGAGCC CAGAAGGACA CATCTTGCTG CCAGATCTGT 1260 GGCAAAAAGG TGTACCTTAC TTTTTTTTTA TAGGCACGGT TCAGCCGTAC CACAAACCCA 1320 CATGGTCAGG AAGTGACTCA CGTATTAATG CCGTTTGAGT TTGTGTGCTG TGGGGAAGGT 1380 CTTTTGACAA TATTGTGTAT ACTGGCTTTT CCAATCTAAG AGAACATCTT TGCTGCATTA 1440 ACAGTAGATG TTACATATTT TTTTCCCTTT AAACCCCCCA TGACCAATAG CTTACCCTAT 1500 GGCAAGTATA GTTAGGTTAC TCGTAATAAT TAATTTGGTA TGCTAACTAG TTGAGCTCAC 1560 AGAAAAATGC AAGTATGGGT GTATTCCTTT ATAATGCTGG GGTGTTTCTT GGGGAGGGTC 1620 TTAATATTTT ACCAACTTAG GTTTTACCAA TTTTTGCATA TTTATGTCAA ATATTCCTAT 1680 TTGCAGAGTA GTACTAACTT TTGCTTTCCA ATTACAAAAG TAGTAAATGT TTGTTGTTAA 1740 AAAGTACGAT AATGATAGTA TTTCCAGAAG AAAAGTAAAA TTCCCCACAA TCCCTTCATG 1800 GCAATAGCTA TATTGTTTTG ATTATATGCA CTTCCATACT TCATCTGTAC CATGTTTGTA 1860 TGATTACAAA AATAGGGCTG GGCGGAACAC ATACTTTAAA TTTGTTTTTT CCTTTACATG 1920 TCTTTGACTC ATTTATTCAT TCAAGAAATC TTTTTTGAGA ATGTACAATG TGCTAGTCCA 1980 TCACTTTTCT AAGTGCAGTG GAGACTACAG TGAAAAACCA ATGGAGCTCA 2030
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