EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
HS051-20230 
Organism
Homo sapiens 
Tissue/cell
Fetal_thymus 
Coordinate
chr3:151958800-151962650 
TF binding sites/motifs
Number: 12             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Foxd3MA0041.1chr3:151960459-151960471GTTTGTTTGTTT+6.32
GFI1MA0038.2chr3:151961995-151962007TGCTGTGATTTC-6.22
Gfi1bMA0483.1chr3:151961995-151962006TGCTGTGATTT-6.62
IRF1MA0050.2chr3:151959906-151959927ATGAAGAAAAAGAAAGTAATA-6.05
IRF1MA0050.2chr3:151959342-151959363ACAAAAAAAATGAAAGCAAAG-6.55
NFAT5MA0606.1chr3:151960417-151960427AATGGAAAAT-6.02
NFATC1MA0624.1chr3:151960417-151960427AATGGAAAAT-6.02
NFATC3MA0625.1chr3:151960417-151960427AATGGAAAAT-6.02
Nr2f6(var.2)MA0728.1chr3:151961812-151961827TGAACTCCTGACCTC-6.22
SNAI2MA0745.2chr3:151961186-151961196TGCACCTGTT-6.02
SPI1MA0080.4chr3:151962076-151962090AACTTCCTCTTTTG-6.89
SPICMA0687.1chr3:151962076-151962090AACTTCCTCTTTTG-6.45
Number of super-enhancer constituents: 34             
IDCoordinateTissue/cell
SE_11923chr3:151957245-151962463CD3
SE_12878chr3:151960678-151964436CD34_Primary_RO01480
SE_13321chr3:151958128-151965411CD34_Primary_RO01536
SE_14133chr3:151960784-151965201CD34_Primary_RO01549
SE_14391chr3:151957170-151965152CD4_Memory_Primary_7pool
SE_15541chr3:151960364-151964313CD4_Memory_Primary_8pool
SE_15977chr3:151960560-151963948CD4_Naive_Primary_7pool
SE_16400chr3:151959479-151964420CD4_Naive_Primary_8pool
SE_17003chr3:151958532-151959322CD4p_CD225int_CD127p_Tmem
SE_17003chr3:151959633-151960637CD4p_CD225int_CD127p_Tmem
SE_17003chr3:151960840-151962672CD4p_CD225int_CD127p_Tmem
SE_17840chr3:151957450-151964884CD4p_CD25-_CD45ROp_Memory
SE_19211chr3:151958274-151962708CD4p_CD25-_Il17p_PMAstim_Th17
SE_20191chr3:151958287-151962633CD56
SE_20806chr3:151957941-151964299CD8_Memory_7pool
SE_21582chr3:151959622-151962821CD8_Naive_7pool
SE_22068chr3:151957402-151964704CD8_Naive_8pool
SE_25603chr3:151957103-151965352DND41
SE_25790chr3:151960160-151962407Duodenum_Smooth_Muscle
SE_31371chr3:151958627-151964060Fetal_Thymus
SE_39578chr3:151958018-151960499Jurkat
SE_39578chr3:151960642-151964950Jurkat
SE_49950chr3:151955426-151966435RPMI-8402
SE_50676chr3:151960304-151961311Sigmoid_Colon
SE_50676chr3:151961353-151961994Sigmoid_Colon
SE_52702chr3:151960257-151961198Small_Intestine
SE_52702chr3:151961416-151962000Small_Intestine
SE_58341chr3:151941277-152022461Ly1
SE_59872chr3:151959817-152042932Ly4
SE_60773chr3:151960393-152021075DHL6
SE_61480chr3:151938720-152020942Toledo
SE_62311chr3:151957212-152047090Tonsil
SE_66395chr3:151958018-151960499Jurkat
SE_66395chr3:151960642-151964950Jurkat
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr3151958804151961339
Enhancer Sequence
TGCAGACTCT TTTCTGTACA TTGCAAGTAG AAATGATTTT ATATTTTGCA TTGGTGAAAA 60
CTTTTCTAGG GAGATAACTG GGTTGGAAAC AGAGATTTGG GAGCAATCAG TATTTGCCAG 120
TTAAAACCAT GCAAGGATAG TGAGATTGTC GGGTAAGGAG AGCAAGCCCA GGACAGAATC 180
CTGAGAAGTG GCAACATTTA CTAGAGGAGC AGAGTTTAAA GACTCATAAA TAAATCAGAG 240
AAGTTGCCAC ATAATCAGAA GGTGAGAGTG AAGTCAAGAG CTGAAAGACA GATAACATTT 300
CCTGGAGGAG GAAGTGGTCA ACATTGGCAT GTGCTGAAAA CAGGTCAAGT AAGAGGGCTT 360
TTGGATTTTG GATTTGGTAA CAGGGAGATC ACTGGTGATT TTGGCAAGAG TCTTGATAAA 420
TAGGAGGAAG CAGAAACCCA TGCAGGAGGA AGAAATGTGA GAAAGATAGG TGGACTTAGT 480
ATGGTGGGTC CTCAAAAAGT ATAAAATTAC AGTATGATTC AATTCCACTT CTGGGTGTAT 540
ATACAAAAAA AATGAAAGCA AAGATTCAAA CAGATATTTG CACACCCATG TTTATAGCAG 600
CATTATTCTC AATAGCCAAA GATAGCAACA ACTCAAGTGT CCATCATCTG ATAAATAGGA 660
AACAAATGTG GTATATACAT ACAATAGAAT ATTATTCAGC TTTAAGAAGG AAGGAAATTC 720
TGACACATGC TGCAACTTTG ATGAACCTAA GTGAAATAAG CCAGACACAA ATGGACAAAT 780
GTCATATGGT TCCATTCATA TGAAGTACCT AGAGTAATCA CATTCATAGA GATAGAAAGT 840
AGAATGGTGG TTGCCAGGTT GAGGGCAGGA AGGAACGTTC AGTTATTGTT TAATAGGTAC 900
AGAGTTTCAG TCTAGAAGAA TGAGAAAGTT CTGGAGATAG ATGGTGGTGA TGGTTGCCTA 960
ACAGTGTGAA TGTACTTAAT GCCTCTGAAC TGTACATTTA AAAATGGTTC AAATGGTAAA 1020
TTTTGTTAAA TATATTCTAC CATACACACA TACAAAAAAG ATATAAGGGC TCAAGTCAAT 1080
GTGGGCAACT TTCTCAAAAA GTTCTGATGA AGAAAAAGAA AGTAATATGA CAAGTCAGTC 1140
AGAGGAGGAA TTTTTAATAG GGAAGAAACT TGAGCATATT TATCAGCCTG GAAGGGATCA 1200
TTAGAGAAGA AGAGAAGTAG AGATATACAT CCACTATTCA GGCAAAAGGT ACACAAATAT 1260
TGAGGAAATA CATTAAAATT ACAGCAGACA TTGAGGACTA TGCTTCCAGA GTGTGACTGG 1320
GTCTTTGGGG ACTGATAAGC CTAGTGTTTT ATATAATGAT ACCCAAATAC AATAATATTT 1380
AAAATTTGTC TAAACACATA GAATCTAAGC AATTTTAATC ACATTGACAA CTTCTCTGTA 1440
GGGATTTCCT TATAAGTAGT TCACAAAGGA ATTCAAATAA AATTTGATAT CAATGACATA 1500
CTGGGGTTTT GTTCGTTTAT TTGTTTTTGT TTTTTGTGCG TTTTATGGAG GGGACAGCTT 1560
TCTGCATTTG GTTTATTTAA CTTCCTGCAA ACTCACATTA AGTATGAGTT TAGGTGAAAT 1620
GGAAAATATT TCAGCTTCTA ATCATCTCCT AATTACTCTG TTTGTTTGTT TTTGAGACGG 1680
AGTCTCACCC TATGGCCGAG GCTGGAGTGC AGTGGCAGGA TCCCGGCTCA CTGCAAACTC 1740
TGCCTCTCAG GTTCAAGGGA TTCTCCTGCC TCAGCCTCCT GAGTAGCTGG GATTACAGGG 1800
GCCTGCCAAA GTGCCTGGCT AATTTTTGTA TTTTTTTTAG TAGAGATGGG GTTTCACCAT 1860
GTTGGCCAGG CTGATCTCGA ACTCCTGACC TCAAGTGATC CACCCACCTC GGCCTCCCAA 1920
AGTGCTGGGA TTACAGGCGT GAGCCACTGT GCCCAGTCTA AGTACTCTTT AATGCCTCTT 1980
TGGACATAAG GTTAAATAAA AAGCAAAGAG TGTGGTGCAG TGACAGCATG ATAGCTTCTA 2040
AAGTCCAGAA AGTGGTTCTT GCAACATGTG GAGGTTTGCA TAATTACTGT ATTGCTCTTG 2100
CAATCCATCT CCTTCTTCCC CAATGAGCAA GGGAGTTTGG GAGCAACTGC CACACATAAA 2160
AAATGAAGCT ACACATTGGC TTCTATTATC TGGCAACCTA AACCCATGAT AAATATATTT 2220
GTATATATCC TTTTATTTGA ATTTGGCAGT AGTACTTGCT TTGATCAACT TTTTTATGTC 2280
TTTTTTCAAC CATTGTCCCT ACTGTCCTTT AAATATTCTC ATTTACTACT CCAACCTGTA 2340
AGAAACTTAG CCAGCTAAAT GTTCAGTTTT GCAGGATCTG CACCTCTGCA CCTGTTTTTT 2400
ACTCTTGTGG CTGAAGTAGT GAAAGACCAT AGTTCATGTG TAAGTAACAG TTTCAGTTTT 2460
GCAGTGCTTT ATCTATATGT AACAGGCAAC TATTCATGAG AAAGGAAGTT TGAGACTTGT 2520
AGGTAAAAAA CCGCTACCCA AATTCCAGGA AAATGTCTGT TTACTGGAGG TTTTTTTTTT 2580
TTCTTCCTTT AATAAGATGC CTGTAGTCAG ATTAGCATTT GTGTCATACT TCAAAGACTT 2640
TAAATTAATT AGACTTGTAA AAGCAAGTTA ATTCCCATAT ATCAGCTGGA CAGTTTTCTT 2700
CTGCATAGAG CAATGTTTTC TGTGATCATT GAGCCACACA GGAGATGCTT CCTTATGTAA 2760
ACGAGCACTA CTTAATCAAG TATAGGTTTC TTTTCTTTTC TTTTCTTTTT TGAAATGGAG 2820
TCTCACTGTG TCTCCCAGCC TGGAAAGCAA TGGCCGCGAT CTCAGCTCAC TGCAACCTCC 2880
GCCTCCTGAG TTCAAGCGAT TCTCCTGCCT CAGTCTCCTG AGTAAGTGGG ATTCAGACGC 2940
CTGCCACCAT GCCAGGCTAA CTTTTGTATT TTTAGTAGAG ACGGAGTTTC ACTATGTTGG 3000
CCAGGCTGGT CTTGAACTCC TGACCTCAGG TAATCTGCCC GCTTCAGCCT CCCAAAGTGC 3060
TGGGATTACA GGCGTCAGCC ACCGTGCCAG GCCAACTATA GGTTTCAATA GCTTAACTTT 3120
TCTAAAATTT GCTTACACAT ATAAACATGC ATATACTTTA ATTATATATG TGTACAGGCA 3180
CCAATTATAG CCTGTTGCTG TGATTTCAAG TGTAAGCTTT ATGAATAATT TTCCATGCCC 3240
CATAAAATGG ATAAAGCATA ATGACTGTTA TTTCATAACT TCCTCTTTTG GTGGACTATC 3300
CTTTTGCAGA GGAAAAAAAA TAATGTAACT AGAGAAGAGA GTTGAGCAGA GAACTGAGCT 3360
CTTTGAAGTG CTGGTAGTTT GTCTCAACCC ATGAAGCAGC TTAACAAGCA ACTATAACTA 3420
AGCATAGAGG TAAGAACAAT TATTTGCTAT TTTTCATTTT ATTATTTGGA TTGCTATTTA 3480
TATAGCAACA ATTTAAATGC TGGCCACATT ACAGTGTAGA TTAGATAAAC CTGATAACTC 3540
TTTCAAGTAA GTAACCGACA TTTTAAATAA AAAGTTTAAT ACATTTACAA AGCTTCAGCT 3600
TCACATACAA GCTTTTAAAA ACCTGGAAAA ATTTAAAGTT TTCATTGATC TCCAAATTAT 3660
TTTACCTGCA AAATAAAACG TTATCTTTCT TGTGTATTTG TAATTTTGCA CACAATTTAG 3720
TGCTGAAGAG GCATTTGGAT TATTAACAAA TTTGATAACT TTTCTTCTTT CCCAGCTCTA 3780
GATTATTTCT AATATTCTCT CACAGATATA CTTTTGTTCA TTTTGCATAT TATTAGTTGA 3840
GCACTTTCCA 3850