EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-19603

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr3:52265560-52265950

Target genes

Number: 18
Name	Ensembl ID

RPL29	ENSG00000162244
POC1A	ENSG00000164087
ALDOAP1	ENSG00000242849
ALAS1	ENSG00000023330
TLR9	ENSG00000239732
RP11	ENSG00000173366
TWF2	ENSG00000247596
RP5	ENSG00000243224
PPM1M	ENSG00000164088
MIRLET7G	ENSG00000199150
GLYCTK	ENSG00000168237
WDR82	ENSG00000164091
MIR135A1	ENSG00000207926
DNAH1	ENSG00000114841
PHF7	ENSG00000010318
BAP1	ENSG00000163930
SEMA3G	ENSG00000010319
TNNC1	ENSG00000114854

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr3:52265704-52265723	CCACCAGCAGGGGGAGCCC	+	6.39
ZIC1	MA0696.1	chr3:52265689-52265703	CGCAGCAGGTGGCC	-	6.04

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I052231

chr3

52265316

52266271

Enhancer Sequence

GGGCAAGGGC CAAACCGTAA GAGGCCTCTG GGCAGGGCTG CCTCTCCCGG AACAGACAGG 60
TGCCTCTGGA GGAACTCGGT GGGCTCACTG CGCTGGCACA CCTGGCAGAG GGCCAGCCCG 120
GGGCCAGGAC GCAGCAGGTG GCCCCCACCA GCAGGGGGAG CCCTCGTCCA GCCTGATCAC 180
AGCCTCCGGA GCCAGGCTGA TGCCTGGAGA GCAAGAGGTA CCCAGGCTGC GGGCACAGGG 240
ACTTGACCCT CTCTCAGACT CCCTAGGGCA CGGCCTGACA GCTCTTCCCC CACCCTCCAG 300
GGGCAGGCCT GTGTCCCCTC TTGGATCCCC CAGGGCAAGG CCTTGTTGCC TGGCTCAGCC 360
CCAGCTCCCC TCCTCACTTC CCACTGGCCC 390