| Tag | Content |
|---|
EnhancerAtlas ID | HS051-19099 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr3:16327240-16327840 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| LMX1B | MA0703.2 | chr3:16327665-16327676 | TTAATTAAAAT | - | 6.62 | | SOX10 | MA0442.2 | chr3:16327274-16327285 | AAAACAAAGAC | + | 6.14 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_12130 | chr3:16326063-16330589 | CD3 | | SE_14821 | chr3:16325711-16333187 | CD4_Memory_Primary_7pool | | SE_15950 | chr3:16326406-16331073 | CD4_Naive_Primary_7pool | | SE_16759 | chr3:16326689-16330500 | CD4_Naive_Primary_8pool | | SE_17628 | chr3:16325823-16334798 | CD4p_CD25-_CD45RAp_Naive | | SE_18413 | chr3:16325747-16365659 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_21644 | chr3:16326148-16333671 | CD8_Naive_7pool | | SE_22042 | chr3:16326024-16333556 | CD8_Naive_8pool | | SE_22576 | chr3:16326182-16335679 | CD8_primiary | | SE_25404 | chr3:16327657-16335769 | DND41 | | SE_31338 | chr3:16327055-16329223 | Fetal_Thymus | | SE_55374 | chr3:16327329-16328837 | Thymus | | SE_62660 | chr3:16326268-16361148 | Tonsil |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH03I016284 | chr3 | 16326260 | 16333449 |
|
Enhancer Sequence | TCGTGTGATA AAAAATGAAT TTGAAAATTA ATTAAAAACA AAGACATGAA GAATGCAAAC 60
CCATTTTGTT TTCTGTTACT AGACTCAATA GGCACAAGAT TGTTCTGTGA AATTGTTAAA 120
AGTTTCTAAG TGCCTGCTTT TGATTTCTGA AATTAGCTCT TTGTGGGCTC CTTACACCCC 180
CAGAAGCAAG AGTGGGCCTC ACTTTGCCCA GTGCTGATGG AGAATTTAAC GGCAGCTCCT 240
TGATAAGACC CTGGCTTGTT TACAGAGTTC CAATTCCCTG AGCTCTTCCC AGAGTGCCTA 300
GCCCAGTGCA CAGCACATTG TGGATACTCA TCAGATAAAT GCCGGTTAAA AGATCCCTTG 360
AATAGATGAT TTTTGAATGT AGGATAAAAT TAAATTAGTA TGATAGCAAG TCTCTCAAAA 420
AAAAGTTAAT TAAAATGTAT TCACATGGTG GTAGGCTGAA CTAAAGCAAA GTGTGTTTTA 480
CCTTGTTTGG CAATTTTCAA AAACCACATC TTTGTAGGTT TCAAAAACCT TAGTTCTCAG 540
GATGCCACCA TTTGTCCCTT GTGCTGTGTA CGCACTAACC TCAGCCACAG TTCATCTTTT 600
|
