Tag | Content |
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EnhancerAtlas ID | HS051-17494 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr20:47353800-47356000 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Myod1 | MA0499.1 | chr20:47355227-47355240 | GGGGACAGCTGCT | - | 7.04 | Myog | MA0500.1 | chr20:47355230-47355241 | GACAGCTGCTG | + | 6.14 | NFYA | MA0060.3 | chr20:47354169-47354180 | AACCAATCAGA | + | 6.62 | SOX10 | MA0442.2 | chr20:47355989-47356000 | TCCTTTGTTTT | - | 6.32 | SP2 | MA0516.2 | chr20:47354320-47354337 | ATAAGCCCCTCCCATTC | + | 6.37 | Sox3 | MA0514.1 | chr20:47355990-47356000 | CCTTTGTTTT | + | 6.02 | Tcf12 | MA0521.1 | chr20:47355230-47355241 | GACAGCTGCTG | + | 6.02 |
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| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_01671 | chr20:47354368-47357034 | Aorta | SE_03141 | chr20:47353753-47357193 | Brain_Angular_Gyrus | SE_03860 | chr20:47352646-47357274 | Brain_Anterior_Caudate | SE_04767 | chr20:47330290-47357597 | Brain_Cingulate_Gyrus | SE_05768 | chr20:47330773-47357344 | Brain_Hippocampus_Middle | SE_06681 | chr20:47321409-47357433 | Brain_Hippocampus_Middle_150 | SE_07719 | chr20:47329977-47357562 | Brain_Inferior_Temporal_Lobe | SE_08847 | chr20:47354585-47355007 | Brain_Mid_Frontal_Lobe | SE_09151 | chr20:47353839-47357374 | CD14 | SE_11697 | chr20:47353783-47356584 | CD20 | SE_14588 | chr20:47354199-47356996 | CD4_Memory_Primary_7pool | SE_16488 | chr20:47355140-47356190 | CD4_Naive_Primary_8pool | SE_18054 | chr20:47354068-47357368 | CD4p_CD25-_CD45ROp_Memory | SE_18819 | chr20:47354063-47357233 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19386 | chr20:47354052-47357337 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20065 | chr20:47354132-47357341 | CD56 | SE_22493 | chr20:47354199-47357283 | CD8_primiary | SE_32607 | chr20:47354044-47358612 | GM12878 | SE_42516 | chr20:47353714-47355907 | Lung | SE_50554 | chr20:47354020-47356510 | Sigmoid_Colon | SE_53697 | chr20:47354561-47355631 | Spleen | SE_65415 | chr20:47354581-47356039 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr20 | 47354512 | 47355881 | chr20 | 47353848 | 47354358 |
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| Number: 2 | ID | Chromosome | Start | End |
GH20I048737 | chr20 | 47353901 | 47354050 | GH20I048738 | chr20 | 47354074 | 47357229 |
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Enhancer Sequence | AAGGCAGCAG ATAGACTCGT GGGTTTAGGG AAAGCATCGG GAGGGTCCCA GGCAGATTTT 60 GGGAATTATG ATGGTCCCTG ACCCCAGGAT GTTTTACGTC TCATTCATGC ACTGTCCTTC 120 TCCCCTGAAT CTCCTGGGAC TGTCAGCTCC ATCGGGACGG CGTTTTCATC TGTTGAGGTC 180 ACTGCTGTGA TGTCAATGGG GTCAGCGGCC ACTGGCAGAG AGCAGGTATT GTGACTATTT 240 GATGAATGAA AGGAAGAAAA GAGAAGGAGG AACGGAGAGG CTAAAGGGCC CTCAGACCAG 300 CTCTGTGCTT CTTCCCAGGC TGGTCCCACC CCACCCCAGG GACCATAAGT GAGCACATGA 360 CCCAGACAAA ACCAATCAGA GTTCCCCGTC CTAATAACAG TGGCCATGTG ACCCAAGCTG 420 GGCCGCAAGA GCCCGCAAGG ACTCGAGCTG GAATCACTGG GAAGAGAAAC TCTCTTTGAG 480 CTGCTGTTGA ACCCCTGCCA CCATGTGAGG CATGCACCCC ATAAGCCCCT CCCATTCTCC 540 AAGAGTGAAA TCAGCACTGC ACAGATAAAA GCAGAGCCTG AGATCAGAGA AAGACCTGGT 600 CCTGAAATCA TCATACGGAG TCCTGGATCT AGCTATGCCT GAAGCCAACC TACACTCCTG 660 AACAATTTCA CTGACATGCA TCAGTAAAGT CCTGTATTTG TTTAAGCCTA TCTGAACTGG 720 TGTTTCTGTC ACGTACAGCA AAGACAGTTT TGATACATGC ACACTCTTAA AGGCAGAAAA 780 TGAAAGACAT GGACCCAAAT CTTAGTGAGG TGACAGGGTC TCTCTGTCCA TCTCCACAGA 840 GATGAAGGGA AGGGACTGGG CCAGAAAGCA GGGACAAATC GGTTTCTTCC CACATACCAA 900 CCCCAGTCAC TGGGTAGTGC CAGCTGGAAC ACTGGTGAGG AGGATTCTGG GGCCCCACAG 960 GAAGCCTAGA GACAGAATGC TGTGATTGAT TAGGAATGTC TGCCACAGGT GCAGGAGAGG 1020 GGGTAACAAG CTCACCACTG GTTTGTCATT CCTCATCCCC TGAGCCCCCT TCTACGACAA 1080 GGTCTGCAAT GTTTTCCTCT CCTTCAGCCT GTGGGAAGGG CAGGGGCCCA ACGCTTGAGG 1140 CTTGGAGAAG TTAAATTTAG CAAAGGACAA CATCCCCTCT GCAGCACCGT GCCCAGTTCA 1200 ATCACGCCTG TGTCCTTTCA TCCAGCCTGA CCCCAGCTGC ATCTCAGGCC TGAGACCCTG 1260 CAAATACGGA AACGCTGCTC TTGACAGCTC AGAGTCCAAG TGTTCCATTT CCTCCTGGAG 1320 GCCCGACATG GGGCTCTGAT TGCTTTGCCA GGAAGAAACG GACAAACAGT TGTGCATACA 1380 CAGATGTGGT GGGTACGGAA CATGTGGCTG TGGGTTTGGG GGGAGAAGGG GACAGCTGCT 1440 GGCTGGAAAC AGCCAGGGGA GGGGAGCTCA CCCCCAGGAA AGGCTCAAGG ATTGTGAGAG 1500 GTGGCAGCTG CTGTCCACAA TACCCAGGTG ACAGTGGCTC CACAGAGACC ATCAGCTCCA 1560 AACCACTCAT TTCACAGCCA GCAAGACTAA GACCCAGAAG AGGGAAGGAG CTGGCCCATG 1620 CAGACATATT CTCCAGTGGG GAGGAGAGAA GTGAGAATCA GGTCTCAGTT TCTCAACAGT 1680 CTCCCCAAAT TATTTACCCA TCCATACAGC TGTGGGGAGA GGGGGGTTAA AACAGAAATC 1740 AGACCACACT ACTCCCGTGC TTAAAACCTG CAATGGCTTT CACTGACTCA GAATAAGATC 1800 TACAGTCCTC ACCTCGGCAC GCAAAGCCCT ACAGGATCTG CCCTGCCCCC ACTATGACAC 1860 CCTCAAACTC TCTCTATCAC TCACTCTGCT CTGGCCACGC CAGTCTCCCT TCTTCTCTCA 1920 AATGAGCTAA GCTTGCTCCC AGCTCAGGGC TTCTGCCCTT TCTCACCTTG GTCCAGACCA 1980 CCCTCCCCAA GATCATCCCA TTCCAACCCC TCAGAAAGGC CATCCCACCC TTGGGTTGCC 2040 AGATATAAAA TAAACCCCAG GATGCCCAGG TGAATGCTCA TTTCAGACAC ATATTTTTTT 2100 TAGTATAAGT ATGTCTCAAA TATTCCATAA GACATGTTTC CACTAAAAAA TTATTTGATG 2160 TTTACCTGAA ATTCCAATTT CCCTGGGTGT CCTTTGTTTT 2200
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