Tag | Content |
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EnhancerAtlas ID | HS051-17209 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr20:30253890-30255010 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RORA | MA0071.1 | chr20:30254891-30254901 | ATCAAGGTCA | + | 6.02 |
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| Number of super-enhancer constituents: 39 | ID | Coordinate | Tissue/cell |
SE_01656 | chr20:30251593-30255062 | Aorta | SE_03156 | chr20:30251628-30255068 | Brain_Angular_Gyrus | SE_03894 | chr20:30251234-30256284 | Brain_Anterior_Caudate | SE_04818 | chr20:30251012-30278616 | Brain_Cingulate_Gyrus | SE_05813 | chr20:30250994-30271647 | Brain_Hippocampus_Middle | SE_06739 | chr20:30251224-30256437 | Brain_Hippocampus_Middle_150 | SE_07749 | chr20:30249036-30256401 | Brain_Inferior_Temporal_Lobe | SE_08789 | chr20:30254242-30254774 | Brain_Mid_Frontal_Lobe | SE_13448 | chr20:30254128-30255176 | CD34_Primary_RO01536 | SE_14426 | chr20:30251256-30256364 | CD4_Memory_Primary_7pool | SE_18483 | chr20:30253825-30255097 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19226 | chr20:30254046-30255079 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20456 | chr20:30251268-30256502 | CD56 | SE_20764 | chr20:30252184-30256407 | CD8_Memory_7pool | SE_22440 | chr20:30251269-30256411 | CD8_primiary | SE_25330 | chr20:30251098-30256224 | DND41 | SE_30903 | chr20:30251126-30256247 | Fetal_Thymus | SE_31430 | chr20:30251145-30256293 | Gastric | SE_34309 | chr20:30251340-30255178 | HCT-116 | SE_39443 | chr20:30253916-30254474 | Jurkat | SE_39853 | chr20:30253476-30255101 | K562 | SE_40644 | chr20:30251193-30256255 | Left_Ventricle | SE_41648 | chr20:30251726-30254586 | LNCaP | SE_42121 | chr20:30251496-30256350 | Lung | SE_47264 | chr20:30251190-30256311 | Panc1 | SE_48182 | chr20:30252376-30255098 | Psoas_Muscle | SE_49346 | chr20:30251223-30255077 | Right_Atrium | SE_50155 | chr20:30251132-30255104 | Sigmoid_Colon | SE_52373 | chr20:30251406-30255074 | Small_Intestine | SE_53471 | chr20:30253670-30256253 | Spleen | SE_55108 | chr20:30254034-30255039 | Thymus | SE_57201 | chr20:30254084-30255003 | VACO_400 | SE_58612 | chr20:30249012-30312162 | Ly1 | SE_59155 | chr20:30248900-30312556 | Ly3 | SE_61228 | chr20:30249013-30312452 | HBL1 | SE_61455 | chr20:30248898-30312277 | Toledo | SE_62770 | chr20:30248811-30312352 | Tonsil | SE_65412 | chr20:30251623-30256414 | Pancreatic_islets | SE_66334 | chr20:30253916-30254474 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr20 | 30254323 | 30254942 | chr20 | 30254400 | 30254942 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I031661 | chr20 | 30248961 | 30259586 |
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Enhancer Sequence | TGCAGGGAGA GAGAAGGAAG GTGCAGTTTT AGTCCTCAGA GAGTGATGTA GGTGGGTGGG 60 GAAAGGGGCC ATCTGCATGC TATGGCCTTG GTGATGTGAA AAACTGTAGC CATCTGTGCC 120 CACTCTGGGC CAGGTAAAGG GCTAAGGGTG GTCCTCTTTC TTGACCCTCC ATTGGTGATA 180 ATCAAACCAT GTTACTGCTG AGAAACAGGT AGAGAGGAGG AAAGTGCCCT GTCTGAGGTA 240 AGTCAAGAAG TAGCACTTAC TCCAGAATCC AAGGTGGGAA CGAGATGGGC AGGGTCAGGG 300 AACTGATGGA AGCCAGGTGG CTGGAGCAGA GTGCAGGAGA GGAGGGCATG GGGGAGATGA 360 TGGTGCAGGG GTGAGCAAGA GCCAGACCAT ACGTGGCCTG GAAGCCGCAA GGAGCCTAGA 420 GTTGAGTCTG AGGGTAGTGT GGAGTGTGGA GCCACTAGGC CTCAGATTTT CTACTGCTGC 480 ACCAGAGGGA GGGATAAGGA AGCCCAGGGC TAAATCCCCA GGGTCATTTG AGGCCAATTC 540 AGGGGTAGAA TGGGTCCTGG GACTTCAGCC AGAGGCTCCT CCCTCTGGAG GGAGCCTCTG 600 GTGGGCAGGT TGGTGACAAG AAGAGCAGGG CAGAGGAGAG AGGGTAACAA TGATGCAGGA 660 CTGACAGGCC TCCATCACGG GGTCTGTGAG GCCTTGTCCC GGACATCCTC CACTGCAGGG 720 GGTGTGACTC TGGGCCCAGG AGGTTGTGAT CAACAGCCCT CTGCCCTGAA TCTAAGTCAG 780 AAGGGAAGCA CATGACAGGG GGAAGGAGGA GCTGTGGGCT AAATTACCCA GCCCAGGGTG 840 CAGCAGCCTG TGGGGCAGGG AGAAGGACGC TTAGAACATA ACTTTTATGA GTAAGCGTAG 900 TACCCAATTT GTCCTTTAAT CCTCCCAACA ATTCTGCAAT GCAGGCTGTC TCTCCCCATT 960 TACAGGCCAA GAAGCTGTGC CTCTGAGGGT CCAGGGACTG GATCAAGGTC ACCCAGCTGT 1020 GTCAGTGGTG GAGCCAGAAT CTAAAACTGG CATCTGGCAC CTAGAAATAT GTAAGAAAGA 1080 AGTAAGTTCC AGGCTGGGTG CGGTGGCTCA TGCCTATAAT 1120
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