Tag | Content |
---|
EnhancerAtlas ID | HS051-17208 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr20:30248910-30250860 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr20:30249518-30249537 | TGGCCACCAGGGGGCAGTG | + | 9.34 | KLF5 | MA0599.1 | chr20:30249559-30249569 | GGGGCGGGGC | - | 6.02 | KLF5 | MA0599.1 | chr20:30249564-30249574 | GGGGCGGGGC | - | 6.02 | KLF5 | MA0599.1 | chr20:30249569-30249579 | GGGGCGGGGC | - | 6.02 |
|
| Number of super-enhancer constituents: 45 | ID | Coordinate | Tissue/cell |
SE_01656 | chr20:30249567-30250426 | Aorta | SE_03156 | chr20:30249170-30250757 | Brain_Angular_Gyrus | SE_03894 | chr20:30249163-30250895 | Brain_Anterior_Caudate | SE_04818 | chr20:30249127-30250835 | Brain_Cingulate_Gyrus | SE_05813 | chr20:30248763-30250955 | Brain_Hippocampus_Middle | SE_06739 | chr20:30249164-30251010 | Brain_Hippocampus_Middle_150 | SE_07749 | chr20:30249036-30256401 | Brain_Inferior_Temporal_Lobe | SE_08789 | chr20:30249642-30249930 | Brain_Mid_Frontal_Lobe | SE_08789 | chr20:30250030-30250284 | Brain_Mid_Frontal_Lobe | SE_13448 | chr20:30249620-30250979 | CD34_Primary_RO01536 | SE_14426 | chr20:30249172-30251036 | CD4_Memory_Primary_7pool | SE_18483 | chr20:30249128-30250445 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19226 | chr20:30249315-30250382 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20456 | chr20:30249038-30251013 | CD56 | SE_20764 | chr20:30249170-30250857 | CD8_Memory_7pool | SE_22440 | chr20:30249203-30250865 | CD8_primiary | SE_25330 | chr20:30248870-30250919 | DND41 | SE_30903 | chr20:30249053-30250911 | Fetal_Thymus | SE_31430 | chr20:30249380-30250824 | Gastric | SE_34309 | chr20:30249316-30250913 | HCT-116 | SE_36989 | chr20:30249136-30252648 | HSMMtube | SE_39443 | chr20:30249173-30249550 | Jurkat | SE_39853 | chr20:30249019-30250851 | K562 | SE_40644 | chr20:30249168-30250937 | Left_Ventricle | SE_41648 | chr20:30249909-30250408 | LNCaP | SE_42121 | chr20:30249163-30250928 | Lung | SE_45708 | chr20:30249279-30250806 | Osteoblasts | SE_47264 | chr20:30248773-30250971 | Panc1 | SE_48182 | chr20:30249330-30250787 | Psoas_Muscle | SE_49346 | chr20:30249366-30250848 | Right_Atrium | SE_49886 | chr20:30249065-30250848 | RPMI-8402 | SE_50155 | chr20:30249175-30250849 | Sigmoid_Colon | SE_52373 | chr20:30249418-30250827 | Small_Intestine | SE_53471 | chr20:30249304-30250508 | Spleen | SE_55108 | chr20:30249168-30249552 | Thymus | SE_55108 | chr20:30249586-30250086 | Thymus | SE_55108 | chr20:30250117-30250819 | Thymus | SE_57201 | chr20:30249174-30250477 | VACO_400 | SE_58612 | chr20:30249012-30312162 | Ly1 | SE_59155 | chr20:30248900-30312556 | Ly3 | SE_61228 | chr20:30249013-30312452 | HBL1 | SE_61455 | chr20:30248898-30312277 | Toledo | SE_62770 | chr20:30248811-30312352 | Tonsil | SE_65412 | chr20:30248819-30250674 | Pancreatic_islets | SE_66334 | chr20:30249173-30249550 | Jurkat |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I031661 | chr20 | 30248961 | 30259586 |
|
Enhancer Sequence | TGGGAGGCCG GGGCCAAGTG ATGGCTTGAG ACCAGGAGTT CGAGACCAGC CTGGGCAACA 60 TGGCAAAACC CTGTCTCTGC AAAAATACAA AAAAATTAGC CGGGTATGGT GGCGTGCTCC 120 TGTAGTCACA GTGGGAGGCT GAGGTGGGAG GATCACCTGA GCCCAGGAAG TCGAGGCTGC 180 AGTGAGCTAT GATCAGGCCA CTGCACTCCA GCCTGGGCAA CAGAGTGAGA CCCTCTCTCA 240 AAAAATAAAA AATAAATAAA TAAATAAATA AAAGAGCGAG TGAAGACATT TCTGGAAGCA 300 CATGGAGAAT GTGAGGAAGG GACTTGAACG GCTATGGCTA GGGGCAGGAG CTGAGGACAC 360 ATCGTGGGGG AAGGCGTGAG TGGGAGGCTG GAGGCTTTGG TCTTGAACCA AACAAGATGG 420 CGATTCTAAG CTCCAGAGAG CCCATACAAG CTCTGAATCC AGTACCTAAG GGTTGGAAGT 480 GTAGCTGTTT TTCTGGTGAG TAGGGTAGAG GATGGAGGAC ATTGGGGAAA GTGGCCCCCC 540 GGCGAGAGAG GTCGTGTGCA CTGAGCGGGA GCAGCTTGAG CTGGGGCTGG CTCTCAGGTC 600 GCATCCTGTG GCCACCAGGG GGCAGTGAAG CCCACTCCGA AAAGCGGGCG GGGCGGGGCG 660 GGGCGGGGCG CCTGGGGCAT GTCCCACCTC CAGGCCTGCC CTCCAGCTGG AGCTCCTGAC 720 CGCTTTTCCC AGACCCCTCC TGGACCGCTG GACGCGGCCA CGCGGGACTC CGAGAGTGCA 780 GCACCTCCTC TCTTCTCCTG GAGAGCCCGG GGGAATGCCG AGTCCATCCC CGCGGTCACC 840 CTCAACATCC AGTCCTCCTC CACTGCTTCT AGGTTATCTC ATTCAATTGC CCATCACACC 900 CATTTTGTAG AGGGGAAAGC TGGGGCACAG AGAGAGTAGG TAACTCACTC ACTGGAAGCC 960 ACGGCTCGAG AAATGACGAC CCGGGACACA AATCTGGCTG TCCATCCTCA AAACCGGAGC 1020 ATTCATGAAA CCATGGCTTC CTCACTGATC TCCTTGTTTC CACTCTGCTT CCCCTCCGGA 1080 ACCTTCTCCA CCCATCAGCC AGAGTTTTGG GGGCTCTCGG GCTGTATCAC TCCCTAACTT 1140 ACCACCTTTC TCTGGCTGTC ACTGCCCTCA GGATCAAGTT CAGTCCTCTC ACCCCACCCT 1200 CTGTCATCAT CTTAAACCCA GCAGCGCCCT CTCTCTTAGC TCTGGACACA CCAGCTTTTC 1260 AGCCTGAAGA CAATGCCTGC TCATCTGGTG CATTTACTGC TTCTTCCCCA GGCCCACTCT 1320 CCTGCCTCCC CACTTAATTT TAAGTTAACC GTGATGCACT CTTCAGGCCC TGGCTCTCAT 1380 GTCAATTCCT CCAGGGAGCC CTCCCTGACT CCTGATTCCC AGACGAGCTC AGATCGCACT 1440 TACTATGAGT CTCTTGGGTT GCACTGGCTT CAAACATGCA CTTCATTTTT GTATCTATAA 1500 TGGCATCACT ATTCTAAAAA TCTGTCATCC TTGAGTCTCT CTGAAGCTAT CTCTACTCCA 1560 TCTGAAATCC TGTGGGATGT GCCTTAAAAA TCTGAAGTCT GACCCCTTCT TACCTCCTTC 1620 TCTACTAAGT CCTTCATGTC TTGGTAGAAG ACCAAACCGC TTCCTCATGG TCGTTGCTTT 1680 TTCCTCCTTT GCCCTTACTG GGGCTTAGAA AACAATACCC CAAAGTATGG CACTTTGGCA 1740 TACCGAATAC TTTGAACTAA AGGAGGCTGA AAGGCCTCAG AAACAAGATC TCTGACTTTC 1800 TCCTGCCTTG CTGTCTCCCA TTTCTCTTTC TCCCCTGAAG CAAGTAACAG AAACTAGCAT 1860 TCATTCCTCT TCCCCAAGGT GGGTCATAGA AACTAGAACT CCTCTCCCCA AAGCAACTCA 1920 TAAAACACAG AAATATATAT ATATATATAC 1950
|