EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-15632

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr2:87015680-87016440

Target genes

Number: 15
Name	Ensembl ID

KDM3A	ENSG00000115548
U6	ENSG00000200563
AC015971.2	ENSG00000228363
RNF103	ENSG00000249884
RMND5A	ENSG00000153561
CHMP3	ENSG00000115561
CD8A	ENSG00000153563
CD8B	ENSG00000172116
AC111200.10	ENSG00000233673
AC111200.2	ENSG00000213605
RGPD1	ENSG00000187627
AC111200.7	ENSG00000231351
AC111200.8	ENSG00000226114
PLGLB1	ENSG00000183281
AC125232.1	ENSG00000231259

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_12469	chr2:87010989-87019803	CD3
SE_16292	chr2:87010369-87019891	CD4_Naive_Primary_8pool
SE_20800	chr2:87010616-87023063	CD8_Memory_7pool
SE_21458	chr2:87010275-87023086	CD8_Naive_7pool
SE_21912	chr2:87009588-87023269	CD8_Naive_8pool
SE_22310	chr2:87009156-87023214	CD8_primiary
SE_30900	chr2:87014182-87023021	Fetal_Thymus
SE_55096	chr2:87015407-87023046	Thymus

Enhancer Sequence

TCCCTGGATA AGGAAAAAGA AGGGAAAAAG TGAGTGCCCC TATCCATCAA TAGTCCCCAA 60
AGACAGTGTA TTTTTTGTTG TTGCTGTTGT TGTTGCTGCT GTTTTTTGGT TTTACAAAAA 120
ATCATTTCAG AACGATCATG GGCTGAAATT GGATGAGGCA AATAGGGAAT TGCCTCTACG 180
AATTCTCCTT CCTTTCCCCT ATTTCTTTGA GGATTATAAC TCTTGAGAGC CGGGTAAGGG 240
CTTCTTATCC ATCCTTCGTC TCAAGCATCA ATTAAAAAAA ATTGCAACTA CAGACGCGGG 300
CGAAAGCGGG GAGCCTGCAG ACCTGATCCG GCACCTCTCT TGCATGGGAC CCAAAGCAGG 360
GTGGGCGGTT CGCCGAAGAG GGCCAAGGAC GAACCTCAAA CTGATGGTGG TTTTGACTAA 420
CCCTCCTGGG CACTTGACTC GGCCACAGCG GCCCCCTCCC GGCGGGCGTT TGTCATGTGT 480
CCAGACATGT GCGCGCGCGC TGCGGGCTTC GTCGACGGAA CACACCCGCT GCAGCGGCTC 540
TGGGAACGCG GCTTTGTCTC CCAAAACCTC TCCGAGAGCG CAAGGAGCGG GAAGGGCTTT 600
CTCGCATTCT ATCTCCCAGA AAGAAGTGCC TGTACCTGCG GGGCAGCTCG GGAGTCCCAG 660
AAAACTCAAC CCCAAGCTCC CCCCTCGCAA GGTCCGCCTG GAGCTAGCAG AGCCAAGGGC 720
AGGAGCGGGG CCGACTCCTT CCCGCCGCGA TTCCTCGGGA 760