EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-14523

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr19:49015100-49016020

Target genes

Number: 23
Name	Ensembl ID

LIG1	ENSG00000105486
CARD8	ENSG00000105483
EMP3	ENSG00000142227
GRIN2D	ENSG00000105464
GRWD1	ENSG00000105447
KCNJ14	ENSG00000182324
CYTH2	ENSG00000105443
LMTK3	ENSG00000142235
SPHK2	ENSG00000063176
RPL18	ENSG00000063177
DBP	ENSG00000105516
AC008888.7	ENSG00000232871
CA11	ENSG00000063180
NTN5	ENSG00000142233
FUT2	ENSG00000176920
RASIP1	ENSG00000105538
BCAT2	ENSG00000105552
PPP1R15A	ENSG00000087074
TULP2	ENSG00000104804
NUCB1	ENSG00000104805
BAX	ENSG00000087088
FTL	ENSG00000087086
RUVBL2	ENSG00000183207

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr19:49015180-49015198	GGAAGGGTGGGAGGAGGG	+	6.13
KLF16	MA0741.1	chr19:49015130-49015141	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr19:49015130-49015140	GCCCCGCCCC	+	6.02
RFX1	MA0509.2	chr19:49015207-49015223	CGTCGTCATGGCAACT	-	6.44
RFX1	MA0509.2	chr19:49015207-49015223	CGTCGTCATGGCAACT	+	6.45
RFX2	MA0600.2	chr19:49015207-49015223	CGTCGTCATGGCAACT	+	6.12
RFX2	MA0600.2	chr19:49015207-49015223	CGTCGTCATGGCAACT	-	6.34
ZNF263	MA0528.1	chr19:49015254-49015275	AGGGGAGGAAATGGGAGGGGG	+	6.04
ZNF740	MA0753.2	chr19:49015109-49015122	ATGGGGGGGGCGA	-	6.14

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_65829

chr19:49013180-49015474

Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I048509

chr19

49012669

49016057

Enhancer Sequence

GAGGGTAGGA TGGGGGGGGC GAGAAAGAGG GCCCCGCCCC CGAGGGCAGC CAGGATTGGG 60
GGAGCAGAGA GCCTGTCACA GGAAGGGTGG GAGGAGGGAG GATGGAGCGT CGTCATGGCA 120
ACTGGCTCCC CCGTAGCATT GGCTGCCAGG AGGGAGGGGA GGAAATGGGA GGGGGAGGGA 180
CAGACAGGGA CCGGCACACA CTTGCAGCGG GGGTGGGGGG GCAGGGCCCA CGGGTGCCTG 240
GCCCGGACAC CGCTGTGACA TGCCACCAGC ATGGACACAT GTGCTACACG CTAAGATGCA 300
GATGTCAGGC ACGCGCAGCC CACACACAGC TGACACACGT CGCAGGGACC CTCATAGACA 360
AGCGCATCAC ATACAAAGGT GGACAGCCAT CAGCAGACGG GGACACGTAC ACGTCACACA 420
CAAAGACGCA GGGACCGCAC TGGAAACGCA CAGGCAGGCC AGCTTCCAGC ACAGATGCAC 480
CCGGCCACGC AGGAACGTCA AAGCATCACA AAGACCCACA CATGCCCCGG ACAAAGTAAA 540
GCCCCAGATC CACAGACGCA CACGCCACAG ACAAAGATCC CCACGGACAC CACTGTGACA 600
TGCTGACACT CATAGTCACA GCCACGCAGA CAGTCCCTAG ACAAATGGGC AACAAAGAAT 660
ACCCACAGAC ACAAGTATCA CATACATGCA CGTCACACAG ACATGCACAG ACAGCAATTG 720
CACAGACACA CGCAGACACA CACATCACAT GAACTAACAT AGACACGGAC ACAGCAGCTA 780
CACAGAGACA GGCACATCAC ATACATGAGT ACACAGAAAC ATAATACATG CATGTATACG 840
GACACGTAAC ATGCATCACT CACACGGACA CAAGCTTCAC TCACATGGAT ACACACAGAC 900
ACACTACATA CACATGCATG 920