EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-14468

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr19:47628310-47628840

Target genes

Number: 19
Name	Ensembl ID

PRKD2	ENSG00000105287
Y	ENSG00000222614
STRN4	ENSG00000090372
SLC1A5	ENSG00000105281
AP2S1	ENSG00000042753
ARHGAP35	ENSG00000160007
snoU13	ENSG00000252071
NPAS1	ENSG00000130751
TMEM160	ENSG00000130748
ZC3H4	ENSG00000130749
SAE1	ENSG00000142230
BBC3	ENSG00000105327
CCDC9	ENSG00000105321
PRR24	ENSG00000257704
C5AR1	ENSG00000197405
GPR77	ENSG00000134830
DHX34	ENSG00000134815
KPTN	ENSG00000118162
NAPA	ENSG00000105402

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr19:47628651-47628670

TGTTGCCCCCTAGAGGACA

6.17

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_23136	chr19:47628103-47628657	Colon_Crypt_1
SE_23866	chr19:47628281-47628588	Colon_Crypt_2
SE_42396	chr19:47628105-47628801	Lung

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I047125

chr19

47628258

47629190

Enhancer Sequence

CGGCCAGTAA TTATGCTGAT GAAAGACCTG TTTTTTCTCC AGTTCCTGGG ATGGCTCTAG 60
GGAGGGTTAT TTACACTGTG AGTGAGGAGG CATTCACAGA GAAGTTCCTC CAGAGTGTGG 120
AAGAAGCACT ACCATTTGGC ACCAACGCCT GGAGAACAAA GGAGGAGACC ATTGGCCAAA 180
GAGAGGCATT TCCATTTTGT TGGAACCTGC TGACCACCAA CCCATAGCAT TTTTTCCCTT 240
TCTTCCTTGC TAATCCAATC GCAGATTCAT TGAGGAGGTG AGAGGTCCTG AGATCCAGGC 300
TGGAAGAGGA GTGATTGGTC TACCTGGTTC TCAAGGGATA ATGTTGCCCC CTAGAGGACA 360
TTTTGGAAAT TATTAAGGAA AATTAACGAC TGGTTTTTTG GTTGTCATCT GGTTCTCAAG 420
GGAACAGTAT TGCTTCCTTG GGAGAATTTG GAAACTTACC TTTTTTCATC GTCACAATGG 480
TGAAGGGTTT GTTACTGGGA TTAGAGGACA AGGACCAGAC ATGCCAAGAT 530