| Tag | Content |
|---|
EnhancerAtlas ID | HS051-14033 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr19:19483560-19484350 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nkx3-2 | MA0122.3 | chr19:19483728-19483741 | ATTAAGTGGATTA | - | 6 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_09215 | chr19:19483114-19484967 | CD14 | | SE_14988 | chr19:19483154-19484492 | CD4_Memory_Primary_7pool | | SE_21339 | chr19:19483111-19484446 | CD8_Memory_7pool | | SE_23432 | chr19:19483389-19484372 | Colon_Crypt_1 | | SE_32412 | chr19:19483362-19484659 | Gastric | | SE_40222 | chr19:19483245-19484320 | K562 | | SE_43282 | chr19:19483235-19484514 | Lung | | SE_50929 | chr19:19483247-19484750 | Sigmoid_Colon |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I019370 | chr19 | 19481378 | 19484648 |
|
Enhancer Sequence | CCTCCTGCCT CAGCCTCCCA AATTGTTGGG GGGTTACAGG CATGAGCTAC TGTGCCTGAC 60
CTGGAAGTGG ATTTTGAAGT GGATTTTGCA GCCTGTTTGT GTCTCCCAAG CCACAAAAGA 120
CTCTGACCTT CGTGTTTGAC CAGTTCCTTG GAAGGCACCA GTCTGTGTAT TAAGTGGATT 180
ATCCAAACCC AGACTGACTC CTGGCACATG GAAGATGCTT TGGGATACAC TTATACTAAA 240
AGGGTATTCA TTCGTGACTG ATCTGAAATC CAAATCTAAT GGGGCATCCT ATATTTTCAC 300
TTGCTAAATG TGGCCACCCT AGATGCTCAA TGACATCCTT GAATAAAGGA AGCTGATGAA 360
GTTCAAACAA ATAATTTTAC CAGCGGGGTA AAAAAAGCTC AAAGCTCAGT GCACTTTGCG 420
AAACAGTCAT TTCCTCTTCC GGTCAGAATA AACTCCTGAC TCCTCCCAGG CCCAAGTGAT 480
CAGCCACTCC CTCCTACCAG CTGGCTGGGC TGCTGTGCTC AGTCCCAACT CAGGAAGGAC 540
AAGAGTAGCT CCTGTGACCA TAATGCCTGT CCACAAGCTG AGGCCCCACC CCACTCCGCC 600
TCCTTTTCTT TTTCTTTGAA ATGGAGTCTT GGTCTTTTTG CCCAGGCTAG AGTGCAGTGG 660
CGTGATCTCG GCTCACTGCA ACCTCCACCT CCCAGGCTCA AGCGATTCTC CTGCCTCAGC 720
CTCCCAAACA GCTGGGATTA CAGGCATGCA CCACCACCCC CAGCTAATTT TTGTATTTTT 780
AGTAGAGACA 790
|
