EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-13950

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr19:17641700-17642020

Target genes

Number: 20
Name	Ensembl ID

MYO9B	ENSG00000099331
USE1	ENSG00000053501
NR2F6	ENSG00000160113
BABAM1	ENSG00000105393
ABHD8	ENSG00000127220
MRPL34	ENSG00000130312
DDA1	ENSG00000130311
ANO8	ENSG00000074855
GTPBP3	ENSG00000130299
PLVAP	ENSG00000130300
BST2	ENSG00000130303
FAM125A	ENSG00000141971
CTD	ENSG00000254503
SLC27A1	ENSG00000130304
PGLS	ENSG00000130313
FAM129C	ENSG00000167483
GLT25D1	ENSG00000130309
JAK3	ENSG00000105639
RPL18A	ENSG00000105640
CCDC124	ENSG00000007080

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr19:17641821-17641833	AAATAAACATTC	-	6.74
NR2F1	MA0017.2	chr19:17641904-17641917	CAGAGGTCAAGAG	+	7.04
Nr2f6(var.2)	MA0728.1	chr19:17641906-17641921	GAGGTCAAGAGTTCA	+	7.64
RARA	MA0729.1	chr19:17641906-17641924	GAGGTCAAGAGTTCAAGA	+	6.45

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_59372

chr19:17628746-17642213

Ly3

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I017530

chr19

17641410

17641858

Enhancer Sequence

GTTGTGGGGG CAGAGGACGT TTGAGTGTTA GGGGAGGGTC CTGGAGGAGC CCTCCCTAGG 60
CCATGCTTCC AACCTCAGAC CTTTGCCATT GCCATAGGAT GACTTTAAAT ATGCATTGTT 120
TAAATAAACA TTCACTGAGC AGCCAAGCAA GGTGGCTCCC GTCTGTAATC CCAGCACTTT 180
GGGAGGCCAA GGCAGGCGGA TCACCAGAGG TCAAGAGTTC AAGACCAGCC TCGCCAACAT 240
GGTGAAACCC CGAAACCCCA TCTCTACTAA AAATACAAAA AAAAATTTAG CCAGACCCTG 300
TAGCGCGCAC CTGTAGTCCC 320