Tag | Content |
---|
EnhancerAtlas ID | HS051-13679 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr19:10840860-10843080 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr19:10842847-10842862 | TGAACTCCTGACCTC | - | 6.22 | Zfx | MA0146.2 | chr19:10842273-10842287 | CCCGCCTCGGCCTC | + | 6.01 | Zfx | MA0146.2 | chr19:10843036-10843050 | GAGGCCGAGGCGGG | - | 6.01 |
|
| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_01011 | chr19:10841248-10842052 | Adrenal_Gland | SE_03312 | chr19:10840972-10842116 | Brain_Angular_Gyrus | SE_03312 | chr19:10842212-10842719 | Brain_Angular_Gyrus | SE_04087 | chr19:10839854-10842964 | Brain_Anterior_Caudate | SE_04989 | chr19:10839878-10842953 | Brain_Cingulate_Gyrus | SE_05916 | chr19:10834870-10842982 | Brain_Hippocampus_Middle | SE_06944 | chr19:10836786-10842973 | Brain_Hippocampus_Middle_150 | SE_08009 | chr19:10839939-10842535 | Brain_Inferior_Temporal_Lobe | SE_11457 | chr19:10839845-10844758 | CD20 | SE_14773 | chr19:10840760-10842480 | CD4_Memory_Primary_7pool | SE_23074 | chr19:10840922-10842145 | Colon_Crypt_1 | SE_23074 | chr19:10842262-10842693 | Colon_Crypt_1 | SE_23814 | chr19:10841164-10842094 | Colon_Crypt_2 | SE_23814 | chr19:10842346-10842638 | Colon_Crypt_2 | SE_24803 | chr19:10841169-10842086 | Colon_Crypt_3 | SE_24803 | chr19:10842238-10842637 | Colon_Crypt_3 | SE_31454 | chr19:10840437-10842178 | Gastric | SE_31454 | chr19:10842188-10842695 | Gastric | SE_42575 | chr19:10839882-10842748 | Lung | SE_50068 | chr19:10839844-10842193 | Sigmoid_Colon | SE_50068 | chr19:10842202-10842947 | Sigmoid_Colon | SE_52382 | chr19:10840720-10842788 | Small_Intestine | SE_53539 | chr19:10840988-10843099 | Spleen |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr19 | 10841505 | 10841995 | chr19 | 10842367 | 10842486 | chr19 | 10840983 | 10841086 | chr19 | 10842200 | 10842759 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I010729 | chr19 | 10840077 | 10844128 |
|
Enhancer Sequence | GAAAGTAGCT AAAGGCTGGA AGTGGTGACT CACGCCTGTA ATCCCAGCAC TATGGGAGGC 60 CGAGGCAACA TGGCTTGAGC TCAGGAGTTT GAGACCAGCC TGGGCAACAT GGTGAGACCT 120 CGTCTCTACC AAAAATACAA AAATTAGCAG GCGTGGTGGT GCATGCCTGT ACTCTTAGCT 180 ACTTGGAATC CCGAGGTGCG AGGATCCCTT GAGCTAGGGT AGCGGTGGAA CTTGCAGTGA 240 GCCCACACTG TGCCATTGCA CTGCAGCGTG GGTGACAGAG CGAGACCCTG TCTCAAAAAA 300 AAAAAAGTAG CTAAAAACCA GAATGGAGTG AATTTCACTG CACAGTCATG GAGGGGACCA 360 GGCAGAGGAC AGCCCTGGGT CTTGGTTTTG GAGACTCACA GCCTGCCTGG GGATGCAGGG 420 ACCCTGAAGC AAGGACATCT TCCTTTGGAG GAAGTGGAGA TTTGCTCCAT CTATATAAAG 480 AGTAATAACA GTAATAGGCT GAGACCCTGA GGCTGGGCAG CGTGGGTGTC TATCTGCGTT 540 GGCTTCGAGG GCTGTAAGAT GGGGCTAGCA GCGTCCCCTC CAGGGTGGGA GTGAGGCCCT 600 GTATGGCAAC CTGCGGGGTG CCCCCTCTGA CTTTTGCTTC CTGCCTGGCT GCTCAGTGGC 660 CCTGGCAGGG GCAGGCACCA CTGCTCTTTC TGTTACAAGA GACCTCCTTT GGATAAATCT 720 GAACACGCTC CCATGGCAGA CCTATGGGGC GGTAGACAAG AGGCCAGCAG AGCTGTCCCA 780 GGCCCTGGTG ACACCTCCAT GCCCAGGTGA AGGAGGAGCA GGCTACTTGG AGCCTGCCCT 840 GTGACACACT TTCGCGGTGA TGAGAGCTTC TCAGGGCTGC GATCCTGGCG GGCCAGTCAA 900 GCGGGCAGGA GCAGCCCCAG CCAGGGTGAC CCTGCCTGCT GGGTGATACG CCCTGGCACG 960 ACCAGGCCAG CCCTGGGGAA AGCCCCCAGG GCGGATCAGG GAGGGACACA GCTGTCCTGG 1020 CCATGAGACT TCTGTCTTTT GTATGGATAC ACAGGGTCCT TCTAGAGGGT CACAGCCTCC 1080 ACCCCCGGGA GGCCTACCAG CTGGCCGCGC AGCCAGGATC CTGCAGCCAC CAGGACACTG 1140 CCTTTCCAGG TTGTTCTTTT CTTTTCCTTC TTTTTTTTTT TTTTTTTGAG GCAGAGTCTC 1200 ACAGTGTCGC CCGGGCTGGA GTGCAATGCA TGATCTCAGC TCACTGCAAC CTCCACCTCC 1260 TGGGTTCAAG TGATTCTCCT GCCTCAGCCT CCTGAGTAGC TGGGATTACA GGTGTGCACC 1320 ACCACGCCTG GCTAATTTTT TGTATTTTTA GTAGAGATGG GGTTTTGCCA TGTTGGCCAG 1380 GCTGGTCTCG AACTCCTGGC CTCAGGTGAT CCACCCGCCT CGGCCTCCCA AGGCTCTGGG 1440 ATTACAGGCG TGAGCCGCCG TGCCCGGCCC CCAGGTTGTT CTTTTCTACA TCAACATCAG 1500 GGGACAGTGA CTGAGAGAGG CCACGAGCCA CTGGCTCAGC TTGACGAAGG CTTCCTGTGG 1560 TTTGGGTTGA TGTATCTCTC TGTCTTGCAA CACTGAGTTC CCCGTTGTCT GGGCGGAAGC 1620 CAGTCAGACG GAAGCCCGGC TTCTGTGGTG CCTGCCCTGG TGGCCTGGAC AGGTTGCTGG 1680 GAAGCTCAGG TCAGGCTGCT TTCTGAGGTG GGGAGGCCCC ACCTGGAATG TGCTCCCAGC 1740 ACTGGGTGAA AATTGATGCA CAGGCTTGAT TTTTTTTTTT TTTTTTTGAG ACGGAGTTTC 1800 GCTGTTGTTG CCCAGGCTGG AGTGCAATGG TGCAATCTCG GCTCGCTGCA ACCTCCGCCT 1860 CCCAGGTTCA AGCGATTCTT CTGCCTCAGC CTCCCGAGTA GCTGTGATTA CAGGCGTGCA 1920 CCATCACACC CGGCTAATTT TTTGTATTTT TAGTAGAGAC TGGGTTTCAC CATGGCCAGA 1980 CTGGTCTTGA ACTCCTGACC TCAGGTTATC CGCCTGCTTC AGCCTCCCAG AGTGCTGGGA 2040 TTACAGGCAT GAGCCACCGC GCCCTTAAAC TCTTTTCTGT TAAAGGAGTT ATTCAACTGT 2100 TTACTCGTTG TGGAGAAAAA AAAAAAAAAA AAAACAGGCC GGGCGGTGGC TCATGCCTGT 2160 AATCCCAGCA CTTTGGGAGG CCGAGGCGGG CGGATCACGA GGTCAGGAGA TTGAGACCAT 2220
|