EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-13319

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr19:1455500-1456070

Target genes

Number: 36
Name	Ensembl ID

WDR18	ENSG00000065268
R3HDM4	ENSG00000198858
MED16	ENSG00000175221
PTBP1	ENSG00000011304
PRTN3	ENSG00000196415
C19orf6	ENSG00000182087
CNN2	ENSG00000064666
ABCA7	ENSG00000064687
HMHA1	ENSG00000180448
POLR2E	ENSG00000099817
GPX4	ENSG00000167468
SBNO2	ENSG00000064932
STK11	ENSG00000118046
C19orf26	ENSG00000099625
ATP5D	ENSG00000099624
MIDN	ENSG00000167470
CIRBP	ENSG00000099622
C19orf24	ENSG00000228300
MUM1	ENSG00000160953
EFNA2	ENSG00000099617
AC005330.1	ENSG00000240846
NDUFS7	ENSG00000115286
AC005329.7	ENSG00000248015
GAMT	ENSG00000130005
DAZAP1	ENSG00000071626
RPS15	ENSG00000115268
APC2	ENSG00000115266
C19orf25	ENSG00000119559
PCSK4	ENSG00000115257
REEP6	ENSG00000115255
ADAMTSL5	ENSG00000185761
AC027307.1	ENSG00000222720
MBD3	ENSG00000071655
U6	ENSG00000252933
TCF3	ENSG00000071564
BTBD2	ENSG00000133243

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP2	MA0516.2	chr19:1455763-1455780	AGGTGGGTGGGGCCTAG	-	6.09
SP2	MA0516.2	chr19:1455885-1455902	TAGGAGGCGGGGCTTAG	-	7.01

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_04580	chr19:1455395-1456756	Brain_Anterior_Caudate
SE_07653	chr19:1448648-1457040	Brain_Hippocampus_Middle_150
SE_34483	chr19:1454954-1456959	HCT-116

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I001454

chr19

1454661

1457763

Enhancer Sequence

TGCGGCGGTG GGCGGGGTGG CGCGGCGGTA GGCGGGGCCC TGCGCCAGTG GGCAAATCAG 60
AGTGCAGATA TTATGGGCGG GGTCTGGGGT AATGGGAGGA GTCTTATGCC TCCTGGGTTG 120
GGGGGCGCGG GTTCTGGTTC AGGAGGCGGG GCCAGAAGCT GGAGGTGTTG GTGGGTGGAG 180
TCAGGAGGCT CAGAGCCTGA GCACAAGGGC GGTGGGGTGC GACAGTGGAA GGTGGCATGG 240
CCTGTGGGCA GGGCCAGATC AGCAGGTGGG TGGGGCCTAG AAGGACGAGG TCTAGGTTCT 300
GGGTGGAGCC CAAATGGGAA GTGGGAGGAG TCAGAGCCTG GGATGGACTA AAGGCGGGGT 360
TTAGACAGTG GGTGGGGTCA TATCTTAGGA GGCGGGGCTT AGGGAGCTGG CAGGGCTGGA 420
TCAGGGAGAA GGCAGAGGTA GGGTCAGGGC CTGGGGCGGG GTTATCAGGA AGAGGCGGGG 480
TCAGAGCCCA GGGTGGGGTC ATCCCAGGGA GAGGCGGGGT CAGAGCCGGG GGCGGGGTCA 540
GCTCCAGCAC TTGCCCTCGT GTGGTCCTGA 570