EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-12381

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr17:73029570-73030120

Target genes

Number: 19
Name	Ensembl ID

ICT1	ENSG00000167862
AC087651.1	ENSG00000239607
ATP5H	ENSG00000167863
KCTD2	ENSG00000180901
AC111186.1	ENSG00000232724
SLC16A5	ENSG00000170190
Y	ENSG00000206713
ARMC7	ENSG00000125449
NT5C	ENSG00000125458
HN1	ENSG00000189159
SUMO2	ENSG00000188612
NUP85	ENSG00000125450
MRPS7	ENSG00000125445
GGA3	ENSG00000125447
MIF4GD	ENSG00000125457
SLC25A19	ENSG00000125454
AC011933.1	ENSG00000257073
AC011933.2	ENSG00000228007
GRB2	ENSG00000177885

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr17:73029865-73029876	TCTTCCCGCCC	-	6.14
MYC	MA0147.3	chr17:73029985-73029997	GGCCACGTGCCC	+	7.22

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_03719	chr17:73029489-73030439	Brain_Angular_Gyrus
SE_04657	chr17:73027802-73032036	Brain_Anterior_Caudate
SE_05666	chr17:73027809-73031854	Brain_Cingulate_Gyrus
SE_30626	chr17:73029195-73033268	Fetal_Muscle
SE_41892	chr17:73029560-73032348	LNCaP

Enhancer Sequence

TTTTCAGTGT TTATGTTTCA ATATTCATGA TTAATACTTG TCTGTTCTCC TTCACTTCCT 60
ACGCTACTTT TTCCTAAAAT TCCTGGATTT TTTATCAGTT CTGTAGAGGC GGACAGCAAG 120
GCTCAGGGCG GTAGGAAGGA AACTCCTCCA AACCTCAGTC TTCATACCCC ATGGTCCGGG 180
TGTCCAGGCA ACCACCAAGC GGACCCTCGG GGCTCCATGG GGCGTCCCAG TGCCGGGGGC 240
TGGGGGCTGG TGCTCGCTAA GTAAGGATGG GGGCAGGTCC CTGCGCACCG CGGTATCTTC 300
CCGCCCGCTC ACCAAAAGTG CGCGCGGCAG GGACGGACCC ACTCCATGGA TCGCGCCTCT 360
GTCAGGCCTT CTCTAGGAAA AGGGGACACT CGCTTATGAG GGGAAGGGAT GGCACGGCCA 420
CGTGCCCCAA GCCCCAGTGG CCTAATGGAT AAGGCACTGG CCTCCTAAGC CAGGGATTGT 480
GGGTTCGAGT CCCACCTGGG GTAGAGGTGA AAGTTCCTTT TACGGAATTT TTTATTTCTT 540
TTCTCTTCCC 550