| Tag | Content |
|---|
EnhancerAtlas ID | HS051-11523 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr17:27907260-27908010 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr17:27907499-27907518 | TGGCCACCAGGTGGCACCA | + | 9.7 | | IRF1 | MA0050.2 | chr17:27907778-27907799 | CTTCTGTTTCTTTTTCTTTTT | + | 6.6 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_03576 | chr17:27906928-27907885 | Brain_Angular_Gyrus | | SE_04273 | chr17:27904200-27907921 | Brain_Anterior_Caudate | | SE_05259 | chr17:27903394-27916333 | Brain_Cingulate_Gyrus | | SE_06486 | chr17:27903728-27916430 | Brain_Hippocampus_Middle | | SE_08195 | chr17:27903857-27916430 | Brain_Inferior_Temporal_Lobe | | SE_08898 | chr17:27907253-27907436 | Brain_Mid_Frontal_Lobe | | SE_08898 | chr17:27907600-27907798 | Brain_Mid_Frontal_Lobe |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I029579 | chr17 | 27906961 | 27909521 |
|
Enhancer Sequence | TGGAGCCCAT ATTTGGGTGT ATTTACCATA CACATGCACG CATGCACACA CAACCCAGGT 60
AGAATCAGAC CATAGAAGTA GGAGCCTTGG GGTCTGGAAG AGGTCTGGGT TTAGGATCTG 120
AGTCGCCCAG GCCTGGTTAT GCCCATCTGC CCACACAGGC CCTTGGGGAG GAGAGCACCT 180
CCTCTCTCCA GATCCAGGCC AGCAGGCACA GCCTGGCATG AGGACATGGC CATCAGAGGT 240
GGCCACCAGG TGGCACCAGC ATCCATCTTA TGTGCTGGGT GAGTGGCAGG GGGTGTCCCA 300
CACTGCCTCT CAGACGGAAG CAGAAACACC TCATTCAACC AGCCTCAGCG CACGTGCCTA 360
ATTCTGAGCA CGCTAGAGGC CTAGCCAGCA GTCACAAAGT TAGTCACATC CCTGAAGCCC 420
ACCCATCTTT TCAGCGAAGA GCAGAGGCTT CTCTAAAGAC AGTGGGGTCG GTGCCACTGG 480
GACAGAACCC AGTGGCCCAC CCTCCCAGCC GGAGGTAGCT TCTGTTTCTT TTTCTTTTTT 540
TTTTTTTTGA GACGGAGTTT GGAGTTTTGC TCTTGTTGCT CAGGCTGGAG TGCAATGGCG 600
TGCTCTCGGC TCACCGCAAC CTCTACCTCC TGTGTTCAAG CGATTCTCCT GTCTCAGCCT 660
CCCGAGTAGC TGAGATACAG GCATGCGCCA CCACGCCTGG CTAATTTTGT ATTTTTGGTA 720
GAGACGGGGT TTCTCCATGT TGGCCAGGCT 750
|
