EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS051-11269 
Organism
Homo sapiens 
Tissue/cell
Fetal_thymus 
Coordinate
chr17:8065080-8065560 
Target genes
Number: 50             
NameEnsembl ID
SENP3ENSG00000161956
EIF4A1ENSG00000161960
SNORA48ENSG00000209582
SNORD10ENSG00000238917
SNORA67ENSG00000207152
CD68ENSG00000129226
MPDU1ENSG00000129255
snoU13ENSG00000251860
FXR2ENSG00000129245
TP53ENSG00000141510
RPL29P2ENSG00000240480
KDM6BENSG00000132510
TMEM88ENSG00000167874
CYB5D1ENSG00000182224
CHD3ENSG00000170004
LSMD1ENSG00000183011
SCARNA21ENSG00000252835
AC025335.1ENSG00000179859
KCNAB3ENSG00000170049
RP11ENSG00000262730
CNTROBENSG00000170037
TRAPPC1ENSG00000170043
GUCY2DENSG00000132518
ALOX15BENSG00000179593
AC129492.6ENSG00000214999
ALOX12BENSG00000179477
ALOXE3ENSG00000179148
HES7ENSG00000179111
PER1ENSG00000179094
VAMP2ENSG00000220205
SNORD118ENSG00000200463
TMEM107ENSG00000179029
C17orf59ENSG00000196544
AURKBENSG00000178999
LINC00324ENSG00000178977
CTC1ENSG00000178971
PFASENSG00000178921
RANGRFENSG00000108961
SLC25A35ENSG00000125434
ARHGEF15ENSG00000198844
AC135178.7ENSG00000226871
SNORA69ENSG00000212206
ODF4ENSG00000184650
AC135178.1ENSG00000198150
KRBA2ENSG00000184619
RPL26ENSG00000161970
RNF222ENSG00000189051
NDEL1ENSG00000166579
U7ENSG00000252363
AC025518.1ENSG00000241708
Number of super-enhancer constituents: 28             
IDCoordinateTissue/cell
SE_00915chr17:8064719-8068727Adrenal_Gland
SE_06095chr17:8048659-8068965Brain_Hippocampus_Middle
SE_08822chr17:8064819-8066148Brain_Mid_Frontal_Lobe
SE_10281chr17:8064170-8068300CD19_Primary
SE_11614chr17:8056564-8068594CD20
SE_11834chr17:8063661-8068795CD3
SE_12931chr17:8065000-8066581CD34_Primary_RO01480
SE_15812chr17:8063969-8068523CD4_Naive_Primary_7pool
SE_17838chr17:8052552-8069084CD4p_CD25-_CD45ROp_Memory
SE_21840chr17:8064095-8068818CD8_Naive_7pool
SE_23336chr17:8064714-8068166Colon_Crypt_1
SE_23951chr17:8064926-8067238Colon_Crypt_2
SE_25880chr17:8063832-8066322Duodenum_Smooth_Muscle
SE_31114chr17:8064155-8068584Fetal_Thymus
SE_46669chr17:8064726-8068600Ovary
SE_51143chr17:8048790-8068935Skeletal_Muscle
SE_52024chr17:8065426-8066323Skeletal_Muscle_Myoblast
SE_54258chr17:8061409-8068827Spleen
SE_54584chr17:8049229-8068756Stomach_Smooth_Muscle
SE_55290chr17:8064842-8068479Thymus
SE_57837chr17:8065481-8066996VACO_503
SE_63104chr17:8063632-8068896Tonsil
SE_63830chr17:8064959-8066326HSMM
SE_68229chr17:8053904-8127659TC32
SE_68230chr17:8053904-8127659TC32
SE_68231chr17:8053904-8127659TC32
SE_68232chr17:8053904-8127659TC32
SE_68233chr17:8053904-8127659TC32
Enhancer Sequence
CCACCTGGGA GAAGGGCCCA CGAGGCAGGG GGGTGTGCCA AGGCCCACCT CAGTGAGGGC 60
AATCCTCAAA CATGTGCCCA CCGTGCCACA CATGGAACAT GCACCCTGAT ACTGCCAGGT 120
TAACATGCCA AGGACACACA GAACATGCCT AGCACACCTG GGGACATGCA AGGAGCACAC 180
ATCAGGGGCA TGCTGGTGAC ATCTCAGATG TCATAGCAAC ACCCTCCCTC TATGGAACCT 240
CAGGCGCTCT GTCCATCACC AGAGCACACC TGCCCAGGCT GGCACACCCC AGGCTAGCAA 300
AGCTGATTAA CACCCCCAGC GCCCTTCCAA GTGCGTGCTG ACAGGGAGAC AGGGATGGGG 360
CATGGTATCT TTGTCCGCAA ACCCACAGGC GTGAACTGTC ATCACTCCCA AACCAACATG 420
GGCCCCTACA CCTATACGCC AACCCCCAGG GTCCCTCCTA CTGCTTTTGA CTCCCCCCAC 480