EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS051-11268 
Organism
Homo sapiens 
Tissue/cell
Fetal_thymus 
Coordinate
chr17:8061430-8062460 
Target genes
Number: 44             
NameEnsembl ID
SENP3ENSG00000161956
MPDU1ENSG00000129255
TP53ENSG00000141510
RPL29P2ENSG00000240480
KDM6BENSG00000132510
TMEM88ENSG00000167874
CYB5D1ENSG00000182224
CHD3ENSG00000170004
LSMD1ENSG00000183011
SCARNA21ENSG00000252835
AC025335.1ENSG00000179859
KCNAB3ENSG00000170049
CNTROBENSG00000170037
TRAPPC1ENSG00000170043
GUCY2DENSG00000132518
snoU13ENSG00000238676
ALOX15BENSG00000179593
AC129492.6ENSG00000214999
ALOX12BENSG00000179477
ALOXE3ENSG00000179148
HES7ENSG00000179111
PER1ENSG00000179094
VAMP2ENSG00000220205
SNORD118ENSG00000200463
TMEM107ENSG00000179029
C17orf59ENSG00000196544
AURKBENSG00000178999
LINC00324ENSG00000178977
CTC1ENSG00000178971
PFASENSG00000178921
RANGRFENSG00000108961
SLC25A35ENSG00000125434
ARHGEF15ENSG00000198844
AC135178.7ENSG00000226871
SNORA69ENSG00000212206
ODF4ENSG00000184650
AC135178.1ENSG00000198150
KRBA2ENSG00000184619
RPL26ENSG00000161970
RNF222ENSG00000189051
NDEL1ENSG00000166579
U7ENSG00000252363
AC025518.1ENSG00000241708
RP11ENSG00000244604
TF binding sites/motifs
Number: 3             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
CTCFMA0139.1chr17:8062256-8062275TAGTGCCCCCCTGTGGCCA-6.64
Nr2f6(var.2)MA0728.1chr17:8061726-8061741TGAACTCCTGACCTC-6.22
SREBF1MA0595.1chr17:8061559-8061569GTGGGGTGAT-6.02
Number of super-enhancer constituents: 30             
IDCoordinateTissue/cell
SE_00915chr17:8061636-8062351Adrenal_Gland
SE_03021chr17:8061746-8062236Bladder
SE_06095chr17:8048659-8068965Brain_Hippocampus_Middle
SE_08822chr17:8061840-8062180Brain_Mid_Frontal_Lobe
SE_10281chr17:8061439-8062487CD19_Primary
SE_11614chr17:8056564-8068594CD20
SE_11834chr17:8061464-8062532CD3
SE_15812chr17:8061434-8062507CD4_Naive_Primary_7pool
SE_17838chr17:8052552-8069084CD4p_CD25-_CD45ROp_Memory
SE_23336chr17:8061725-8062343Colon_Crypt_1
SE_23951chr17:8061747-8062250Colon_Crypt_2
SE_25880chr17:8061475-8062721Duodenum_Smooth_Muscle
SE_26709chr17:8053174-8062459Esophagus
SE_31114chr17:8061680-8062534Fetal_Thymus
SE_36084chr17:8061458-8062510HMEC
SE_44875chr17:8061651-8062221NHLF
SE_46669chr17:8061765-8062324Ovary
SE_47541chr17:8061762-8062329Pancreas
SE_49564chr17:8061740-8062247Right_Ventricle
SE_51143chr17:8048790-8068935Skeletal_Muscle
SE_54258chr17:8061409-8068827Spleen
SE_54584chr17:8049229-8068756Stomach_Smooth_Muscle
SE_55290chr17:8061854-8062291Thymus
SE_62914chr17:8053480-8062681Tonsil
SE_64444chr17:8061698-8062313NHEK
SE_68229chr17:8053904-8127659TC32
SE_68230chr17:8053904-8127659TC32
SE_68231chr17:8053904-8127659TC32
SE_68232chr17:8053904-8127659TC32
SE_68233chr17:8053904-8127659TC32
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1780618308062300
Enhancer Sequence
CAAAGTGATA AGATTACAGG CGTGAGCCAC CACACTCTAC CTAAAATATA CTCTCATTTG 60
TTCAACATCG TGTTAAGTGG ATTTTTTTTT TTTGAGACAG TCTCGTTCTG TCACCCAGGC 120
TGGAGCACAG TGGGGTGATC TGGGCTCACT GCAACCTCCA CCTCCCAGGT TCAAGCAATT 180
CTCTGCCTCA GCCTCCCGAG TAGCTGGGAT TACAGGTGCC CGCCACCATC CCCGGCTAAT 240
TTTTTGTGTG TATTTTTAGT AGAGATGTGG TTTCACTGTG TTGGCCAGGC TGGTCTTGAA 300
CTCCTGACCT CGTGATCCGC CCACCTCGGC CTCCCAAAGG GCTGGGATTA CTGGCGTGAG 360
CCACCGCGGC CGGCCACTCA TTGTTGAAGC ACCTGGGAAC AGGGATACTA AGATGCCACA 420
TCGGGGCCTC CTGGACCTAC AGGCTGTGGC AGTTCAGTGT GGGGTCTAAA GTCACAAGTC 480
ATACAACAGA GTACAGGGGT AGTAGGCCAT CTACAGGCAG CTCCACAACA TACTCAGCTT 540
TGTCTCTGTG AGCCTATTTA AACCACAATT TACTAACCCC ATCTGGGCGC TGGCACTGGG 600
TTAGGCACAG AGGGGAAGAC ATGCTTCACA GAAATGGCCA ACTACTTCAT CTACTGCTGC 660
ACGGGAGCCA CGGCAGAGCG TCTAGAAGTT AAATCGAGGA GTAGAAAGGA GTCCAACAGC 720
AGGAACATGC CCCAGTAAAG GGAAACGAAA GCTGGGAACC CTAGACCACA GGGCGCACCG 780
GGCTTAGAGA CACGGGCTGG CTATGACACT TCCCATTACC AACTCCTAGT GCCCCCCTGT 840
GGCCACTTTG AGAATCACAC TTTGCCCTGC CCAAGGTCAG GGCCTCTTGC AAAGTCCAGT 900
CCATTACCAA TGTATCTTCT CAACCTTCCT GGTATACCTT CCGATCCAAT ATTATTCCCA 960
TTGGTTAAGA AAAGATCTTA TTCTCCCCCA ACCAAAAAAA AAAAATAGAA AAATAAAAAA 1020
GATCTTAGAC 1030