EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS051-07042 
Organism
Homo sapiens 
Tissue/cell
Fetal_thymus 
Coordinate
chr12:125422760-125425840 
TF binding sites/motifs
Number: 6             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EGR3MA0732.1chr12:125423847-125423862TACCGCCCCCGCACG+6.16
NR2C2MA0504.1chr12:125425672-125425687CAGGGTCAAAGGGCA+6.81
Nr2f6MA0677.1chr12:125425673-125425687AGGGTCAAAGGGCA+6.43
RxraMA0512.2chr12:125425673-125425687AGGGTCAAAGGGCA+6.41
TP53MA0106.3chr12:125423273-125423291GACGTGCCCAGGCATGTC-6.8
TP53MA0106.3chr12:125423273-125423291GACGTGCCCAGGCATGTC+7.75
Number of super-enhancer constituents: 78             
IDCoordinateTissue/cell
SE_00230chr12:125422206-125426129Adipose_Nuclei
SE_01093chr12:125423450-125425934Adrenal_Gland
SE_02134chr12:125423521-125425956Aorta
SE_02432chr12:125422431-125424531Astrocytes
SE_02966chr12:125423265-125425333Bladder
SE_03321chr12:125423155-125425916Brain_Angular_Gyrus
SE_04055chr12:125422239-125426019Brain_Anterior_Caudate
SE_05165chr12:125422366-125426225Brain_Cingulate_Gyrus
SE_06190chr12:125422810-125426234Brain_Hippocampus_Middle
SE_06843chr12:125422187-125426243Brain_Hippocampus_Middle_150
SE_08021chr12:125422743-125426063Brain_Inferior_Temporal_Lobe
SE_08844chr12:125423446-125423844Brain_Mid_Frontal_Lobe
SE_08844chr12:125424234-125425729Brain_Mid_Frontal_Lobe
SE_09364chr12:125423172-125425475CD14
SE_10520chr12:125423523-125425877CD19_Primary
SE_12257chr12:125423339-125425860CD3
SE_13292chr12:125423606-125424879CD34_Primary_RO01480
SE_13397chr12:125422393-125426052CD34_Primary_RO01536
SE_14431chr12:125421926-125426214CD4_Memory_Primary_7pool
SE_18055chr12:125423050-125426006CD4p_CD25-_CD45ROp_Memory
SE_18766chr12:125422422-125425844CD4p_CD25-_Il17-_PMAstim_Th
SE_19422chr12:125423045-125425949CD4p_CD25-_Il17p_PMAstim_Th17
SE_20264chr12:125423031-125425638CD56
SE_20773chr12:125421983-125425997CD8_Memory_7pool
SE_22892chr12:125422346-125426030CD8_primiary
SE_23158chr12:125423496-125425952Colon_Crypt_1
SE_23827chr12:125423603-125424823Colon_Crypt_2
SE_23827chr12:125424833-125425859Colon_Crypt_2
SE_24836chr12:125424178-125424662Colon_Crypt_3
SE_25623chr12:125421254-125426019DND41
SE_25834chr12:125421950-125426062Duodenum_Smooth_Muscle
SE_26681chr12:125423112-125426066Esophagus
SE_27703chr12:125423012-125426117Fetal_Intestine
SE_28633chr12:125422985-125426010Fetal_Intestine_Large
SE_29734chr12:125422957-125425935Fetal_Muscle
SE_31023chr12:125422527-125425943Fetal_Thymus
SE_31649chr12:125423535-125425984Gastric
SE_32526chr12:125421954-125426012GM12878
SE_33054chr12:125423315-125423938H1
SE_34384chr12:125422464-125426194HCT-116
SE_34668chr12:125421649-125426382HeLa
SE_35911chr12:125422098-125425378HMEC
SE_37255chr12:125421536-125425991HSMMtube
SE_38138chr12:125421949-125426039HUVEC
SE_39917chr12:125422950-125426160K562
SE_40930chr12:125423153-125426136Left_Ventricle
SE_42024chr12:125423499-125425854LNCaP
SE_42298chr12:125423016-125426136Lung
SE_44403chr12:125422183-125425982NHDF-Ad
SE_44876chr12:125422286-125425991NHLF
SE_46113chr12:125422024-125425848Osteoblasts
SE_47332chr12:125422009-125426369Panc1
SE_48238chr12:125423029-125426119Psoas_Muscle
SE_48805chr12:125423536-125426025Right_Atrium
SE_50218chr12:125423553-125426079Sigmoid_Colon
SE_51163chr12:125421795-125426004Skeletal_Muscle
SE_52044chr12:125422591-125424074Skeletal_Muscle_Myoblast
SE_52416chr12:125423150-125426139Small_Intestine
SE_53363chr12:125423096-125426120Spleen
SE_54757chr12:125422112-125425993Stomach_Smooth_Muscle
SE_55437chr12:125423429-125425858Thymus
SE_55862chr12:125421712-125425954u87
SE_57189chr12:125422995-125424174VACO_400
SE_57189chr12:125424196-125425977VACO_400
SE_57479chr12:125423151-125424118VACO_503
SE_58219chr12:125423588-125424162VACO_9m
SE_58459chr12:125390622-125426140Ly1
SE_59316chr12:125398143-125425844Ly3
SE_59670chr12:125390325-125426106Ly4
SE_60560chr12:125385312-125426018DHL6
SE_61223chr12:125398158-125425925HBL1
SE_61569chr12:125389012-125425986Toledo
SE_62372chr12:125386297-125426052Tonsil
SE_63850chr12:125422534-125425619HSMM
SE_64282chr12:125422398-125425402NHEK
SE_65546chr12:125423132-125426022Pancreatic_islets
SE_67381chr12:125422669-125425371MM1S
SE_67582chr12:125421712-125425954u87
Number: 1             
IDChromosomeStartEnd
GH12I124937chr12125421578125426548
Enhancer Sequence
TTTGGTCAAC GGAAGGAAAC TATAACCTCA ATTCTCACTT CTATTACTAC CGTAATAGGT 60
ACACTTCTCC TTCTCGGATG TTATACCATG CCTCTGGAAG CTAATGACAA AATTAATAAC 120
GACAGTTCTT ACCAAAACTA CTAAAACCTA TCTTAACTCT CCTCCACCTT ATTCTAAGAG 180
ATTTCTCCTC TTAAAAGCTC AAGTAGAACA ATTAAGCCAA AACATGCTAA AACAGTTTAA 240
AAAGGAAAAA TTATAAAAAT TAAAAGGGAA GGAAATGTAG AAAGCAAAAG TTCCTCTTCA 300
AAGCTTCCCC TTTAAATCAT AAATGTTATT AATATCTTTT CTCAGAACTA ACTTTCTTCA 360
AATTTCTTAT TTTATAGTAA TAACTCTCTG TTAAGCCTTA GGTAGCAAAT GTAACAGAAT 420
AAGCACACTC TGACTTCGGT ATCTGTGCTA AACATGCTCA CAGGCACGTA GTACATTCTA 480
TGTCCTTGTA CCTTTGTCAA AATATTCGTG CTGGACGTGC CCAGGCATGT CCCAGCTTGC 540
AGCCTACACT CTTCCTTATT TAGGAATATT ATTACTTTTC TAAGTCCTTT CGTAAGGAAC 600
ATCCTTTTTT CCTATGTTCC TCACTGCTTT TACCTATTTA AAAAATTTTT GAACTGTTAG 660
CTAATCGGGT TTTAGTTTAA ATTGTGAGGT CTGGCTGCAG CCAATGAAGT CAAAACACAG 720
CAATAGGGAC CTCATGCATA AGGAATAAAT ATTCTTCAGT TGTATCTGAC TTTTAAAAAT 780
TAGACGTATC ATTTTGATAA AAATCGAATA AGAGAGGAAA GGAAAGAAAA GAAGGGAGAA 840
AAAAATAGAA TTCCAAAAGT CCAGAAAGGT ACAGAAATGG AAAGTCAAAA AGTCACTCCT 900
CCCACCCACC ACCCGAGTCC TTCTCCCCAA AGGCCCCCTA TGTCTACAGT TGATCGTGAC 960
TGATGTGACC GCGGGCGGGC CACGGAGCCT CTGTCTGAGC CTGTATTTCA TCAGTTTGAT 1020
GTGGAGAAAA CGGCTCGTTG GTAGGATCCT TGAGGATGTA ATGCGTGAAC ACTAAAGCGC 1080
TTACCAATAC CGCCCCCGCA CGTTAAGAAC TGTATATTGT TGGCTGCTGC TCCTGCTGCT 1140
GTTGTTACCG TGATGCCAAT CAGAAACATT AATATACTCA CACATTTGTG TGCATATCTA 1200
TAATTTTTTG ACATAAAAAT GAACCTATTA TGCTCACTGC CGAGCACCCT GTTTTTTCTT 1260
CCCTCGAACT CTCCTTGGAG GGGAAGGAAC CCTCGTAAGG GCCCTAATTC AGTGTTGCAG 1320
GCACACCTGC GATGTGCACA TCCTCTTATA CCTACTCTGT ATATTTTGGA ACACCGAAAA 1380
GCATCGCCAA CAAAGTCTCC CCTCTGTATT TAAAAATACG AAAGTACCCG GCCTCCCCGT 1440
CGGGGAATCG AACCCCGGTC TCCCGCGTGA CAGGCGGGGA TACTCACCAC TATACTAACG 1500
AGGACAAGCC GTACTGTGTT CCCTGCAGCT CCCTTCTTAT GTCCATACCA TTCTCTCGCT 1560
ATCGTTCCTA ACCTTTCCGG GCCATCCAGG CTCCGCGCCG GGCACCCTGG CTGCTGGGCT 1620
TATCCAAGGC GGGTAGAGGC CCCTTTGAGT GGCTGGAGGC ACTGCACGTT CCGAAGCTAA 1680
GGCACCTGAA CTAGCAGAGC GAAGGGCACT TCCTGTATCA CCATCCCCAG AAAAGACCAA 1740
CACAAGGGGT AGGGGATGTA GCTCAGTGGT AGAGCGCATG CTTTGCACGT ATGAGGCCCC 1800
GGGTTCAATC CCCGGCATCT CCAGACTTTT CCGCCTTTTT CGGGCAAATT ACAGTCACGT 1860
GGTTACAAAA GCTTGGAAGA GGACCCAGGC AACCCTCAAC AACCTGCCTG CGAAGAAAGC 1920
TCCCTTGGAA GGGGCTGCGC CAGCACATTT CCCTGCCCCT AATCACAAAT GCCCTGGGCC 1980
CCTCCACCGG AGATTCGCGT TCAGTAGGTC AGTGACGGGG CCGGGAATCT GCCATTTGAA 2040
ACGAATACTC CCAGTTATTT GTTTCATCAA GCAGATAGAA AAACATGGAT TCCTTAGAAA 2100
GGTTCTGCAA CTGACCATTC ATTAACTCCT GAGGGCCTCA TGTCAGGTTC CGTGCATGCA 2160
CTGAGCACCT ACTGTGTGCC GGGTAAAGTG TACGTCCCCT GGTATCCCTG GATAAGACAG 2220
GCCAGGCAAG CTTTCTCAGC CTTTTTGGAC TTTATAGTCC AGTCCTGGAG ACTTAACAAT 2280
AAGCAAGTAG CGATACGTTT TATGAAGACA ATAATAGCGA TGAGATGGAA ACTCAGGGGT 2340
GCAGGAGTGG GGGTTGCTTT AGATTAGCTG CCAGGGGAGA CCTCTGCAGA AACAGTGCTT 2400
CCAGCGAAGG AAACGGCAGG TGCCAAGGCC CTGAGGCTGG AGGAAGGGCG CTCAGTGTTG 2460
AAGGGGCAGG AAGAAAGCCA TGCCCTGGAG CTTAGTGAAT GAGGATGAAC TTTATCTTCG 2520
AAGACACTGG AAGGCCTGAC GCAGGGGAAC GCGACCAGAT TCAGGTTTGA AAAGGCTCCC 2580
TCTGGCTGCC ATGCGGAGAA CACACCCTGG GCGTGGGTGG ACGTGGGGAG ATCGGGAAGG 2640
AGGTGCAGCC ACCGCCCAGG AAGCTGCTGG AGACTTCCTC CAGGGGTGCT GCAGAGGAAG 2700
TGCGAGCCTG ATGGAGTTCA GGACAAATGC TGGACGTGGT TGCATAGTAT TTCCTAACGG 2760
AGGGGTAGCA CGCTTTATTA CCATTCCTCC TAGGGATTCG GGTAATTTTG TTTCCTCTCA 2820
CTGAAGTCTT GTAGTCAGTG ATCTGGTGCA TGCGTTTTCC TTGCCTTCTG GCGCCGGTAC 2880
CTCGATGGGG CAGATGTCCA CAGGGAGCAA TGCAGGGTCA AAGGGCATGG ATACTTTTAC 2940
AAACGTACTT CTCTGTCGCC CAGGCTGGAA TGCAGTGGTG CGATCATAGC TCACTGCAGC 3000
CTCGAAATCC TTGGCTCAAG AGACCTCCCA GCCTCCCCAA AAGCTGAGAC TACAGGTATA 3060
CTTCACCACC TCCAGCAAAT 3080