EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS051-06948 
Organism
Homo sapiens 
Tissue/cell
Fetal_thymus 
Coordinate
chr12:123348720-123349870 
Target genes
Number: 8             
NameEnsembl ID
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
ESR2MA0258.2chr12:123349168-123349183GGGGCATTGTGACCC-6.29
RUNX1MA0002.2chr12:123349048-123349059AAACCACAGAA-6.32
Stat6MA0520.1chr12:123349013-123349028GCTTCTCAGGAAATC-6.69
TCF3MA0522.2chr12:123349446-123349456AACACCTGCT+6.02
Number of super-enhancer constituents: 14             
IDCoordinateTissue/cell
SE_03969chr12:123349246-123350560Brain_Anterior_Caudate
SE_04866chr12:123348693-123353944Brain_Cingulate_Gyrus
SE_05835chr12:123320384-123351312Brain_Hippocampus_Middle
SE_06752chr12:123348900-123351109Brain_Hippocampus_Middle_150
SE_07820chr12:123348826-123351077Brain_Inferior_Temporal_Lobe
SE_11355chr12:123348896-123350531CD20
SE_25026chr12:123349069-123349459Colon_Crypt_3
SE_25026chr12:123349529-123350811Colon_Crypt_3
SE_31427chr12:123343773-123359126Gastric
SE_40937chr12:123349311-123353958Left_Ventricle
SE_42306chr12:123344180-123353834Lung
SE_47190chr12:123344743-123350827Panc1
SE_61538chr12:123340041-123395084Toledo
SE_65302chr12:123349486-123353585Pancreatic_islets
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr12123348786123349446
Number: 3             
IDChromosomeStartEnd
GH12I122868chr12123348861123349010
GH12I122864chr12123349070123349459
GH12I122867chr12123349543123349906
Enhancer Sequence
TGGCCGAAAC CTTTAATTGA ACAGGCTGCC TCAAGTGTGG GGCTAGAAAG CAGGAGCTTG 60
GGGTCTGGTC CTGCTCCCCC ACCCTCTTGG ACCTGTCACT GCCTCTCCCT GGTCCTCCTT 120
GTGAATGGGA CACACAGCAG GAGGAGAGGC TCCCACAAGG CAAGGTTCAT GAGCCACAAG 180
ACTCTGTGAA GTCCAGCATC CTCACTGGAG TGGACAACAG ATTTGGCTAT AAGCTTCCTG 240
GCAGCCACTG GGAAGAAAGA AACTATCACA CACTTTTTCT TTAAGGCTAA CTGGCTTCTC 300
AGGAAATCCT TCCCTCTTCC TCACAGAAAA ACCACAGAAA TTTCTCCTGT ACATTCTCAT 360
AGAACAATGA TGTGCCAGGA ATGGCAGCTA TTACAGGAGA CAGCAACAGG TGAGCTTGCT 420
CTCATCTCAG TTCCTCAAGT CCCTTGCAGG GGCATTGTGA CCCAGATACA CAGCTTAGCT 480
GGGGTGGTGA GGACGCAGGC ACACGGCTCA GCCGGGGCGA CGGGCATACC TAGCTGCAGG 540
CGCACGGCTC AGCTGGGGCG GCGGACATAC ATAGCTGCAG GCGCACGGCT CAGCCGGGGC 600
GGCGGGCACA GGGCAGTTCT GTAGCTCTGC AAGGAGGCAG GGTTTGCAGG GTCCCCTCCT 660
CTCGGCCTAG AGAAGGAAAC AGCACCCACT GGGCTTTGAA ATGGGCAGAG GCAACTGCCT 720
TCTTGAAACA CCTGCTGGCA AGTCCCCAAA GCAAAACATC AGAGCCACTG GTTTTCCCAC 780
TAAAAACCAA CACAGAAAAT CCTAACAAGT ACCACCATTC ACACAGCACA CGGCGGCAAC 840
CTCACGGACA GAGAGCAGGC ACAGTCTGAG CCCTGAGGTC ACCCTCAGTC CCCTACTTGG 900
ACACAGTGGC TGTGATCCTG AAGACACCCT CTTAAGACAC AGAACATGCC CTGTACGTGA 960
CTGCTGTTTA TGAGACTGGT GACCAAGAGG GTAAGAGGCC CCACCTGTGC CAGGGGCCCT 1020
GGACAGGCAG AGATTTTGTC TTCAGCTTCA AAAACAGACG TCCCAGCCAG CTTCCCTGCT 1080
GGAACTTTGA TCACTGATGT TTCAGAACCA GACATCATGA ACATCCACAT CCCCAAGTAA 1140
ATAAGTGACA 1150