EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-06380

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr12:66219290-66220620

Target genes

Number: 5
Name	Ensembl ID

RP11	ENSG00000250748
PCNPP3	ENSG00000213344
HMGA2	ENSG00000149948
RPSAP52	ENSG00000241749
AC090673.1	ENSG00000211577

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PLAG1

MA0163.1

chr12:66219935-66219949

CCCCCTTTTGCCCC

6.05

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_02521	chr12:66216256-66223955	Astrocytes
SE_34269	chr12:66215345-66223074	HCT-116
SE_35690	chr12:66215912-66223357	HepG2
SE_36300	chr12:66215313-66226513	HMEC
SE_38126	chr12:66216499-66225230	HUVEC
SE_45560	chr12:66216020-66227162	Osteoblasts
SE_56011	chr12:66215174-66229826	u87
SE_57866	chr12:66217223-66220414	VACO_503
SE_67524	chr12:66215174-66229826	u87

Enhancer Sequence

GGGGGGAGCG GCGCAGACCC CACGAGTGCG CCGCGCGGCC CCGGGGCGCC AGCAACCCTC 60
CGGGCGGGGA GGTGGGGAGC CGCGGCGGGC GGCCCGGGGA AGGCGGGAGG TGGGGTCGGG 120
CGAAGCGCGT CCTCGGACTT TCGCTATTGT GCACGGCCCC GAGTGGCGCG GTGTCGCCCA 180
GTGACTGGAA GCGACCGGGA TCCGACAAAC CCGGGCTCGC AGGCGCTTTC CGAGTTGCTT 240
TTGCAACTGC CCGGGAGGAA GGAGGTGCCG GGGACCCGGG CGCTTCGGCC GATCTGGGCT 300
GAAGGGGCTA GAGTCTTGGG GGCCGGAGGC TCTTTCTCCC GCCTCCCGGG GCTGCTCGCG 360
GGTCGGGGGC TGGCGCGCCG CAGCCGCCCC CTTGGCGCCC TCCTCCAAGC TCTCGGTGGC 420
CCAAGACTCG CGCCCTCCCG ACAAAGAACG CATGGAGACC CGGCTGCCTG GTCCTTTTTG 480
GGCTCTTTAA ATATGCGGCG GCCGCCGGAG GGAGCCCGGG GCAGGGGCTA CGGGGAGCCT 540
GGTTCCCCGC AGGACGGGGT TAACTCGCCC AGCTAAGGGC GCGTTGAAAG GAGTGTCCAA 600
GAGAGTGCAG GGTAGCCAGG GTCGCTTCCT TGTCAGGGGC CCGGTCCCCC TTTTGCCCCT 660
GGATCTCGCG CCTCAGAGCT GCAGCCATTA AATGCTCTTC TCCAAGGCCA GTGGCCGGGG 720
GTTGAGTAGG GGACGATCGA GGGGCGCCCG GGACCCTGCG GAGTGGAGGG TTTTGTCTGC 780
GGATGCAACC AATTAAGCGT GCAGCCGGCG CTTGCAGAGC TGCGCTCAGC GCGCAGGGCT 840
GGGGGTTTTG TTCGCTGTAA TTTCCAAGCC GCGGCGGGCA GAGTTGGAGC GGGATATGTC 900
TATTGAGAAC ATTTAAACTC CACTTTCTCG GGCTTTAAAA CTTGCTCTCT GCTTAGTCTT 960
AAATCGCTTC CTTCATGGCA AACACGCCGA TTAGAAAATA ATCCTAGAGT CCCAAAGTTG 1020
TCCGAGAGCA AGGTGGGGAA ACTGAACAAT GTTTGCTTGC CAGTGCATTT TAGAAAAATT 1080
GAGAGTTGTA CCTTTTTGAA ATCATCAAAG GAAACAAGCC GATCTAGAGG CCCCTGAGTT 1140
TTCCCGCTCT GCCCAAGCGA CACTTTACAC CGCATTTGAA TCCTGTTTTA CACCTCCCAG 1200
GAAGTCTCTG CCCTCCCCCA CTTGTTTCCC ACCCGCCACC CAGTTCTAAC TCACTAATTG 1260
CCCCCCCTCC AAAAAAAAAA AAAAAATCCA AAAGAAATTA CAATGGGGTC TGGAGGTGAT 1320
TGGATACTTT 1330