EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS051-05660 
Organism
Homo sapiens 
Tissue/cell
Fetal_thymus 
Coordinate
chr12:6570100-6571190 
Target genes
Number: 45             
NameEnsembl ID
YENSG00000202318
RP1ENSG00000256103
PLEKHG6ENSG00000008323
TNFRSF1AENSG00000067182
LTBRENSG00000111321
SCNN1AENSG00000111319
CD27ENSG00000139193
LOC678655ENSG00000215039
TAPBPLENSG00000139192
VAMP1ENSG00000139190
NCAPD2ENSG00000010292
MRPL51ENSG00000111639
SCARNA10ENSG00000239002
RP5ENSG00000255966
GAPDHENSG00000111640
IFFO1ENSG00000010295
NOP2ENSG00000111641
SCARNA11ENSG00000247853
CHD4ENSG00000111642
LPAR5ENSG00000184574
ACRBPENSG00000111644
ING4ENSG00000111653
ZNF384ENSG00000126746
C12orf53ENSG00000139200
COPS7AENSG00000111652
MLF2ENSG00000089693
LAG3ENSG00000089692
CD4ENSG00000010610
GNB3ENSG00000111664
CDCA3ENSG00000111665
USP5ENSG00000111667
TPI1ENSG00000111669
RPL13P5ENSG00000240370
LRRC23ENSG00000010626
DSTNP2ENSG00000248593
SPSB2ENSG00000111671
ENO2ENSG00000111674
ATN1ENSG00000111676
C12orf57ENSG00000111678
PTPN6ENSG00000111679
MIR200CENSG00000207713
SCARNA12ENSG00000238795
PHB2ENSG00000215021
U47924.19ENSG00000255896
C1SENSG00000182326
TF binding sites/motifs
Number: 2             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
IRF1MA0050.2chr12:6570246-6570267TAAATGAAAATGAAACCAGTC-6.65
ZNF263MA0528.1chr12:6571003-6571024TGAGGATGATGGGGAAAAGGG+6.07
Number of super-enhancer constituents: 7             
IDCoordinateTissue/cell
SE_12378chr12:6569409-6574758CD3
SE_18827chr12:6565778-6576436CD4p_CD25-_Il17-_PMAstim_Th
SE_19709chr12:6568922-6574591CD4p_CD25-_Il17p_PMAstim_Th17
SE_23009chr12:6569052-6575871CD8_primiary
SE_43158chr12:6569603-6572907Lung
SE_44027chr12:6569344-6572335MM1S
SE_55464chr12:6569695-6574422Thymus
Number: 1             
IDChromosomeStartEnd
GH12I006459chr1265681706574449
Enhancer Sequence
CAAGGTAAGA GCCTGGGTGC CCTTGGCTCT GGCCCTGGCC CACCTCACCC ACTCTAACCA 60
CCCCCCCGCC CAGACCAGGG TGGAAGCCCA GATGCCCCAA GCTCCAGCCA CCCACCCATC 120
ACAGCCTCCT GCTTTTGAGT TTGCCCTAAA TGAAAATGAA ACCAGTCGTG TTCCCTCGTT 180
TTCTCCTAGC TACCTCACTA AAGTCTGTCA CTCTCCTGCC TCAGAGTAGA AAGAAAGAGT 240
AGTCACGTGC TCCCAGAAGG ACTCTAAGTC AAGTCACAGA GCTAAAAATA CATGAAGGTG 300
GCACCAGCTC ATGGGGCACT GGGCCTGGCT CTGCAGAGGC CTCTGCCTTC CTTCACTGTG 360
CACCCTGGGC TCATGCACCA AGGCAGAGAA CAGGAAGAAG TGAGGGGACA AGAAGAAGGC 420
AGAATGTCCA GATGGAGGAT AAGACCAAAG AGCCAGGTTG GTGGTGTGAC GGTAGGAAAA 480
CAAAGCTGGA GGAAATGGAG AAGGAACAAG TGAGGGACAA TGAGGCATGG GTTGGGGCTG 540
GGCTACCCCT CCCAAACTCA GCTCTGTCAA AATAAAAGGC CCTTGTGTCT GCTGCGACCA 600
AGCTTTTCCA CTTTCCTGTC TTTCTCCACA CTGGTCCCAA CTGAGCCCTG TCACCAAGCC 660
TAGCGGCTCC AACTTGCAAA GTGTTTAAGT ATGAAACAAA GGCCCTCAGA GGCACCCCCG 720
TGGCTCCATC TCAGTTGCAC CTCAGCTGCA ATTAGGGTTC TGCTCCCTCG GGTGACTGCT 780
GGGAGGTTCA GGATACCTGC AAATGCCTCA CTCCCTCAGC TGCAAGGAGA GACTTCTCCT 840
TTTTATTCGT TTCTAAAATG TGCCTAATCA ATACGGTGGA ACTCAGCATA CCAAAACTGT 900
ACGTGAGGAT GATGGGGAAA AGGGGGTAAG GGGGTGTTCA CTGACAGCCT TATCTGGGCA 960
CATCCCCTGG GACAGGACAA GCAGGCCAAG GACCTAGGAA GGAGCACAGG AGGCAGATGG 1020
AAGAGGCCTG AGGGAACCTG TGCTTGTTTG CCAGTGTGAG ATGCCCACGC AACTTCCTGT 1080
CTTCACTTCC 1090