Tag | Content |
---|
EnhancerAtlas ID | HS051-05641 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr12:6319030-6320350 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Klf1 | MA0493.1 | chr12:6319566-6319577 | AGGGTGTGGCT | - | 6.02 | Nr2f6(var.2) | MA0728.1 | chr12:6320222-6320237 | TGAACTCCTGACCTT | - | 6.04 |
|
| Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
SE_01613 | chr12:6319028-6319991 | Aorta | SE_03988 | chr12:6318969-6320195 | Brain_Anterior_Caudate | SE_04905 | chr12:6320205-6328241 | Brain_Cingulate_Gyrus | SE_05857 | chr12:6318642-6328560 | Brain_Hippocampus_Middle | SE_06790 | chr12:6318775-6328722 | Brain_Hippocampus_Middle_150 | SE_07876 | chr12:6318312-6319855 | Brain_Inferior_Temporal_Lobe | SE_23086 | chr12:6319050-6320172 | Colon_Crypt_1 | SE_23760 | chr12:6319095-6319874 | Colon_Crypt_2 | SE_24754 | chr12:6319060-6320180 | Colon_Crypt_3 | SE_26531 | chr12:6318963-6328738 | Esophagus | SE_30052 | chr12:6320140-6321734 | Fetal_Muscle | SE_31631 | chr12:6319037-6319856 | Gastric | SE_41013 | chr12:6319009-6319932 | Left_Ventricle | SE_42122 | chr12:6319058-6320063 | Lung | SE_44470 | chr12:6320161-6322098 | NHDF-Ad | SE_45219 | chr12:6319046-6319714 | NHLF | SE_45219 | chr12:6320083-6322011 | NHLF | SE_48662 | chr12:6319028-6320067 | Right_Atrium | SE_50072 | chr12:6319030-6320121 | Sigmoid_Colon | SE_50072 | chr12:6320199-6326579 | Sigmoid_Colon | SE_52457 | chr12:6319049-6320051 | Small_Intestine | SE_54512 | chr12:6318102-6320065 | Stomach_Smooth_Muscle | SE_54512 | chr12:6320070-6346293 | Stomach_Smooth_Muscle | SE_64246 | chr12:6320144-6328522 | NHEK | SE_68793 | chr12:6319031-6319995 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr12 | 6319474 | 6319566 | chr12 | 6319810 | 6319999 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH12I006210 | chr12 | 6319138 | 6320069 | GH12I006211 | chr12 | 6320256 | 6322214 |
|
Enhancer Sequence | AGTAGAGATG GGGTTTTGCC ACGTTGACCA GGCTGGTCTC GAACTGCTGA CCTCAGGTGA 60 TACGCCCACC TCGGCCTTCC AAAGTGCTGG GATTACAGGC GTGAGTCACC GCGCCCAGCT 120 GGGACTGCTC ATTTCAAATA GAAATTAGAT TATCTTCTAG GATGAGGAGG GACACTTTGG 180 CCTTCTTTGT CATGGGAGGC TGGCACTCTC CTCTAGGACC CTGGGGTGTG TCTTGAGAGC 240 TCGTGCCCAG GGCTATAACA CAGAGAGGCC TGTGCTGATG TCATCTTGTT CTGCCCTTTG 300 CTGGCAGGGT GGTTCTGGGG AAGGGCAGAG GCTCCGGGTC CCACTCTGGG GCTGTTTTCA 360 CGGGGGATGG AAGGACCATG GCCACTGAAC GGGCTGCGGT CCCGTCTATG GACACAATGC 420 CAATGGGCAG CTGCAACAGT GCAGCCAAGG GGAAAGGAGG ATGTGCGAGT TGCCCTGGAG 480 AGTCCCTTCC CAGAGCGCCG CCTCTGTCCA CCCTGACTAT ATGACCAGTG GAACCAAGGG 540 TGTGGCTGAA GCTCTCAGGA CAAAGGCCAG GGAGAGGAAG CACCGGCTGT TTTTTTTAGA 600 CTCTCTTCGA GCACCCACTA CCCCCACTGC CCCCAAGCGA GGCCAGGTGT AGGTGGCATC 660 TCCAGCCCAG GTGGCCATGC AGCTGCCCTG CTGTCAGGGA GGAGGCGCGT CTGCAAGCTG 720 CCTTCCTTCC GGTGCAGATG GGCTCCCTTG TGGCCTTTAA AGATCGAAAA CACCACTTTG 780 AAATGGGATT AGATATGAAT GGGGGGGAAA CAGGCAAAAG GGAAAAAATT CTGGCTTCAG 840 AATAGAAGAA ATGGATCAAA AACACAAACA GCTTAACAAA ATAATTGAGA ATTGGGGCTC 900 TGCAGTCAGA CCATTCTGGG TTCAAGTTCT AACTCTGCCA CTTACTTGCC CTGTGATCTC 960 AGTTGAGCAA CTTTTTTTTT TTTTTTTTTT TGAGAAGGAG TCTCGCTCTG TTGCCAGGCT 1020 GGAGTGCAGT GGCGTGGTCT TGGGTCACTG CAACCTCTGC CTCCTGGGTT CAAGCGATTG 1080 AACAGCCTCA GCCTCCCAAG TAGCTGGGAT TACAGGCACG CACCACCATG CCTGGCTATT 1140 TTTTTATATT TTTAGTAGAG ATGGGGTTTC ACCATGTTGG CCAGGCTGGT CTTGAACTCC 1200 TGACCTTGTG ATCCTCCCGC CTTGGCCTCC CAAAGTGCTG GGATTACAGG CTTGAGCCAC 1260 CGTGCCCGGC CCGAGCAACT TAACTTTTGT GCCCCAGTTT TTTCATCTAA AAAATAGAAG 1320
|