EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-04878

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr11:67046740-67046880

Target genes

Number: 37
Name	Ensembl ID

RHOD	ENSG00000173156
KDM2A	ENSG00000173120
AP001885.1	ENSG00000179038
snoU13	ENSG00000238892
ADRBK1	ENSG00000173020
ANKRD13D	ENSG00000172932
SSH3	ENSG00000172830
POLD4	ENSG00000175482
7SK	ENSG00000201684
AP003419.11	ENSG00000256514
CLCF1	ENSG00000175505
RAD9A	ENSG00000172613
U6	ENSG00000253024
TBC1D10C	ENSG00000175463
CARNS1	ENSG00000172508
PPP1CA	ENSG00000172531
RPS6KB2	ENSG00000175634
AP003419.16	ENSG00000255949
PTPRCAP	ENSG00000213402
CORO1B	ENSG00000172725
CABP4	ENSG00000175544
GPR152	ENSG00000175514
TMEM134	ENSG00000172663
AIP	ENSG00000110711
PITPNM1	ENSG00000110697
CDK2AP2	ENSG00000167797
CABP2	ENSG00000167791
GSTP1	ENSG00000084207
RP11	ENSG00000255119
C11orf72	ENSG00000184224
NDUFV1	ENSG00000167792
DOC2GP	ENSG00000231793
NUDT8	ENSG00000167799
TBX10	ENSG00000167800
ACY3	ENSG00000132744
ALDH3B2	ENSG00000132746
RPL37P2	ENSG00000239559

dbSUPER

Number of super-enhancer constituents: 40
ID	Coordinate	Tissue/cell

SE_04612	chr11:67041925-67047261	Brain_Anterior_Caudate
SE_09470	chr11:67034046-67060962	CD14
SE_10749	chr11:67041673-67048303	CD19_Primary
SE_11135	chr11:67032704-67058329	CD20
SE_12071	chr11:67041995-67048536	CD3
SE_12924	chr11:67045197-67049964	CD34_Primary_RO01480
SE_13406	chr11:67038426-67056775	CD34_Primary_RO01536
SE_14096	chr11:67042001-67049157	CD34_Primary_RO01549
SE_15607	chr11:67044016-67046868	CD4_Memory_Primary_8pool
SE_16170	chr11:67044114-67048795	CD4_Naive_Primary_7pool
SE_16579	chr11:67046230-67047055	CD4_Naive_Primary_8pool
SE_17002	chr11:67041987-67047839	CD4p_CD225int_CD127p_Tmem
SE_17431	chr11:67034049-67058823	CD4p_CD25-_CD45RAp_Naive
SE_17802	chr11:67032955-67051929	CD4p_CD25-_CD45ROp_Memory
SE_18480	chr11:67034087-67051408	CD4p_CD25-_Il17-_PMAstim_Th
SE_19229	chr11:67041708-67048744	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20100	chr11:67034131-67048685	CD56
SE_21088	chr11:67043107-67047041	CD8_Memory_7pool
SE_21735	chr11:67042856-67048644	CD8_Naive_7pool
SE_22111	chr11:67041991-67048788	CD8_Naive_8pool
SE_22633	chr11:67034182-67049136	CD8_primiary
SE_23899	chr11:67044103-67046850	Colon_Crypt_2
SE_25275	chr11:67044107-67046804	Colon_Crypt_3
SE_25556	chr11:67041750-67048382	DND41
SE_26612	chr11:67041683-67048361	Esophagus
SE_30957	chr11:67041733-67047428	Fetal_Thymus
SE_31526	chr11:67041685-67048524	Gastric
SE_39609	chr11:67042659-67047251	Jurkat
SE_41407	chr11:67041664-67048171	Left_Ventricle
SE_42297	chr11:67041637-67052094	Lung
SE_50107	chr11:67041674-67048583	Sigmoid_Colon
SE_52553	chr11:67041681-67048492	Small_Intestine
SE_53318	chr11:67033133-67058464	Spleen
SE_58704	chr11:67029736-67057952	Ly1
SE_59752	chr11:67029702-67058042	Ly4
SE_60657	chr11:67029635-67058158	DHL6
SE_61467	chr11:67029745-67057867	Toledo
SE_62371	chr11:67028536-67058633	Tonsil
SE_65626	chr11:67041938-67047028	Pancreatic_islets
SE_66362	chr11:67042659-67047251	Jurkat

Enhancer Sequence

GGAGGTGAGA CCCAGAGGCC CAAGCCCTGC TCTGCCTGGA GAAAGGGGAG GAGGTTGGGG 60
CGGCTTTGTG GAACCCACAA GCTGCCTGGT GTGGGCATCC CCATTCCCTG CTGGGCTCTA 120
GATGACCTGC AGGAATCCTG 140