EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS051-02600 
Organism
Homo sapiens 
Tissue/cell
Fetal_thymus 
Coordinate
chr1:245025040-245025760 
Target genes
Number: 2             
NameEnsembl ID
TF binding sites/motifs
Number: 1             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Nkx3-2MA0122.3chr1:245025571-245025584TAATCCACTTAAT+6
Number of super-enhancer constituents: 26             
IDCoordinateTissue/cell
SE_07550chr1:245024597-245030028Brain_Hippocampus_Middle_150
SE_12382chr1:245024832-245029180CD3
SE_13082chr1:245024712-245029024CD34_Primary_RO01480
SE_13874chr1:245023551-245030294CD34_Primary_RO01536
SE_14359chr1:245024585-245029595CD34_Primary_RO01549
SE_14934chr1:245022704-245030240CD4_Memory_Primary_7pool
SE_15686chr1:245024635-245029162CD4_Memory_Primary_8pool
SE_16252chr1:245025031-245028967CD4_Naive_Primary_7pool
SE_16794chr1:245023289-245029154CD4_Naive_Primary_8pool
SE_17085chr1:245024254-245029322CD4p_CD225int_CD127p_Tmem
SE_17541chr1:245016610-245030593CD4p_CD25-_CD45RAp_Naive
SE_18089chr1:245022508-245029841CD4p_CD25-_CD45ROp_Memory
SE_19917chr1:245023276-245029118CD4p_CD25-_Il17p_PMAstim_Th17
SE_20675chr1:245023995-245029561CD56
SE_21164chr1:245023437-245030363CD8_Memory_7pool
SE_21776chr1:245024403-245029162CD8_Naive_7pool
SE_22901chr1:245020667-245029738CD8_primiary
SE_24910chr1:245025591-245028880Colon_Crypt_3
SE_27394chr1:245025612-245028904Esophagus
SE_30167chr1:245024910-245030366Fetal_Muscle
SE_40363chr1:245025445-245030192K562
SE_53104chr1:245025005-245025414Small_Intestine
SE_53659chr1:245025620-245029064Spleen
SE_55463chr1:245025663-245028888Thymus
SE_62085chr1:245022411-245030707Toledo
SE_62943chr1:245017878-245029549Tonsil
Enhancer Sequence
TAACAAAAAA AAAAAAAAAA AAAACAAGTC TGACAGTCAA AGCCCACTTA GAGGTTTGCA 60
ATACTTTCTC ACTCAATTGC AACCCAACTG GGTAAAGTAG CAGTATTTAC AGTGCTGCAC 120
TGCCATTGAT ACCATTCGCT GCTGAAGAAA GCTAGTGGCC CAGTGATAGC CCACTGCTGC 180
TGCCTCAGGT CTTTGGAAGA AATCAACTTA TGTTTAAAGC AGCAGCTACT GAACTGGAAT 240
TGAGAACAAA AGAGCAGTTA TTGAAAAAGT AATATTACAA TCTTTTAAAA TAGGGAATAT 300
ACTTGTGTGC TAATGGGAGA AGTCATTAGT AAATATTTAA CTAGCCCAAA TAGCTCACTT 360
AATATAATTC CACAAAAAAA TGAATTACTT TATTGTAGAA GCCTGTAAGG CTAAATTATA 420
GGTAGTGTTA CAAGTTTCCG TTAGCTAGTC AAAAACTGGC ATTAATTTTA CATTTCCTAA 480
GAATGAGAAC TTTCAAGTCA TAAAAATACG AAACTCCTAG AGCCTGTAAA ATAATCCACT 540
TAATACAACT GATGACGTGC TAAATATTAA ACTACTAGGT TCTGAATGTA AACCATTATC 600
TTCCTGCTTT TAAAAAAACT AACCCAAGTT TTGCTGCACT TAAGCATTAA GACTTCTAAA 660
AAAAAAAAAA AAAAAACCAC CATCACCGCA TTTCATAATT GGGGAGAAAC AGCTTCACTT 720