EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-01738

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr1:160804790-160805360

Target genes

Number: 23
Name	Ensembl ID

CD48	ENSG00000117091
LY9	ENSG00000122224
RP11	ENSG00000226003
CD244	ENSG00000122223
ITLN1	ENSG00000179914
TSTD1	ENSG00000215845
F11R	ENSG00000158769
USF1	ENSG00000158773
ARHGAP30	ENSG00000186517
NIT1	ENSG00000158793
PFDN2	ENSG00000143256
DEDD	ENSG00000158796
ACA64	ENSG00000238934
UFC1	ENSG00000143222
USP21	ENSG00000143258
PPOX	ENSG00000143224
B4GALT3	ENSG00000158850
NDUFS2	ENSG00000158864
FCER1G	ENSG00000158869
APOA2	ENSG00000158874
TOMM40L	ENSG00000158882
PCP4L1	ENSG00000248485
SDHC	ENSG00000143252

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr1:160804930-160804949

TGGCCACCAGGAGGCAGTG

7.47

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_18494

chr1:160804353-160809528

CD4p_CD25-_Il17-_PMAstim_Th

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I160836	chr1	160804841	160804990
GH01I160835	chr1	160805329	160810062

Enhancer Sequence

AAACTAGAGA ACTGGCAGAT ATCAACCGCT CTTATAATCA GATTTTCTTT GCCCCACAGC 60
TCAGCCACCA AACTGAAGAT GGTGCTCAAT TTTTTTTTTC TTTTTTTTAA AGCCATTTTT 120
ATCAGAAAGT CTTTTATTAC TGGCCACCAG GAGGCAGTGT TTCCCTTGGG AGAGATGTCC 180
CAGCCTGGGT TATCAATGTC ATTTTAGCCA TCAGTATTAA AGGATGCTTC TCCAGTTTAT 240
GAGTGAATTT CTGTAATCCC AGAATATAAG AGGTGGAGTA TGAGGAGGTG CAATGGAGAC 300
TCAGAAACCC TTTGGCTCAG CTCTGCCACT ACCTAGCTAT GTAGCCTTGA GATATCAGTT 360
GACCTGAGTC TCGGTTTCCT CATTGTGATA TGGAATGTAG ACCACATCTA AAGTATTAGA 420
ACTATTTTCA TGAGGCTGTT ATGTGAGATT TAGTAAGAAA ATACAGCTGG GTGCAGTGGT 480
ACACACCTGC AGACCTAGCT ACCCAGGAGG CTGAGGTGGG AGGATCACTT GAGGCCGGGA 540
ATTCAAGGCT TCAGTAAGCT ATGATTCTAC 570