EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-01582

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr1:155058680-155058880

Target genes

Number: 36
Name	Ensembl ID

KCNN3	ENSG00000143603
PMVK	ENSG00000163344
PBXIP1	ENSG00000163346
PYGO2	ENSG00000163348
SHC1	ENSG00000160691
CKS1B	ENSG00000173207
FLAD1	ENSG00000160688
LENEP	ENSG00000163352
ZBTB7B	ENSG00000160685
DCST2	ENSG00000163354
DCST1	ENSG00000163357
RP11	ENSG00000232093
ADAM15	ENSG00000143537
EFNA4	ENSG00000243364
EFNA3	ENSG00000143590
Y	ENSG00000202027
EFNA1	ENSG00000169242
SLC50A1	ENSG00000169241
DPM3	ENSG00000179085
HMGN2P18	ENSG00000223452
TRIM46	ENSG00000163462
KRTCAP2	ENSG00000163463
MUC1	ENSG00000185499
MTX1	ENSG00000173171
THBS3	ENSG00000169231
GBAP1	ENSG00000160766
MTX1P1	ENSG00000236675
GBA	ENSG00000177628
SCAMP3	ENSG00000116521
CLK2	ENSG00000176444
PKLR	ENSG00000143627
FDPS	ENSG00000160752
RUSC1	ENSG00000160753
MIR555	ENSG00000207720
snoU13	ENSG00000238805
U6	ENSG00000207144

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr1:155058692-155058711

CAGCGCCCTCTGGTGGCCA

9.66

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_24349	chr1:155054349-155058894	Colon_Crypt_2
SE_25203	chr1:155054005-155059103	Colon_Crypt_3
SE_27181	chr1:155052973-155059081	Esophagus
SE_41889	chr1:155051383-155059366	LNCaP
SE_61971	chr1:155049467-155060409	Toledo

Enhancer Sequence

GGTGAGTCTG CGCAGCGCCC TCTGGTGGCC ACTGCTGGAA CCGCAGCCCC CCGCCCCGGT 60
GCCTGCTCAC CTCGCATGCC TTCCCTGGGG GCACTGATAC TTCCTACCCT GTGGGTGGTC 120
ACGTCCCTGG CTCCATTGCT GCTGCCGCGT GCCCCTGCCC TGGCGCGCAA CCCAGCCCTC 180
ACCAGTCTGT CTGTTCCTCT 200