Tag | Content |
---|
EnhancerAtlas ID | HS051-00860 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr1:46644840-46646190 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:46645385-46645404 | TGGTGCCACCTACTGGCAG | - | 7.75 | Crx | MA0467.1 | chr1:46645532-46645543 | AAGAGGATTAG | + | 6.62 | IRF1 | MA0050.2 | chr1:46645615-46645636 | ACAGAGAAAGAGAAAGAGGGA | - | 6.03 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_23257 | chr1:46644683-46648228 | Colon_Crypt_1 | SE_24097 | chr1:46645072-46645482 | Colon_Crypt_2 | SE_24097 | chr1:46645485-46648171 | Colon_Crypt_2 | SE_31897 | chr1:46645550-46652335 | Gastric | SE_34180 | chr1:46645443-46651019 | HCC1954 | SE_41846 | chr1:46645690-46648609 | LNCaP | SE_50730 | chr1:46644589-46652277 | Sigmoid_Colon | SE_65807 | chr1:46644886-46647151 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | AAATTTGCTT GAGTGCCGGC AAATACCTGT GGTCCCAGCT ACTTGGGAGG CTGAGGATCA 60 TTTGAGCTCA GGAGGTCAAG GCTGCAGTGA GCTGTGATGT TGCCACTACA CTCCAACCTG 120 GGCAACAGAG CAAGACCCTG TCTCAGAAAA AAAAAAAAAA AAATCAACTT CCTCCATCTC 180 ATAGCCCCAC TGCCTGTGAC TCTCTCGACT TTGACCTTCT TGCTCTGTGC TCATTCCCTA 240 CTGTCCCTTC CTTCTAGAGC AGGAAGAAAA TCTCATTTGA AAAGCCCAGA ACTATTCTGT 300 TACACAGAAG ACCAGGAAAG AGAAGTTTAA AACCAAGTCT AAGAAAAGTC CCCAGGGTCA 360 CACAGTTCAT AAGCGACAGA GCCAGGATTC CAGCACCTGG TCTGAATGAC CCAGAAGCCA 420 GGACTTTTCC CCCGCACCTC TACATCAGGC GTGCTGGAGC AGGAAGCGGT CAGGCAGCCC 480 CACTAGGAGT AACAAAGATG GGATCACAGA GCCTTGGAAC TGGGGGTGGC TCCTTCATGA 540 GACCATGGTG CCACCTACTG GCAGAAAGAG AAGGGGTGTA CACAGAGCGC TAAGAGAAGA 600 CTGGGAAGGA GAAAAAGAAA AAGATGGGGA AGGAGAGGAG ATGGAAAGAT GAAGGGAGGG 660 GAAAAATGGG GAATGTGAGG TTTCATGGAG GGAAGAGGAT TAGGAACTAT TTGCTACTCG 720 CAGGAGAGAG CGGAAGCTGC CAAATCTCAG TCATTTCCTT GAAAGTGAGT GAGAGACAGA 780 GAAAGAGAAA GAGGGAGTGT GTGTGTGTGT GTGTGTGTGT TTGTGTGTGT GTGTGAGTGA 840 AAGAGATACT TAAGTACGTA CATCAGATAT TATTCTGTTG TTTGTTAGTT GCTGGGAGTC 900 AGTCCACAAA GAATTTAGTG TGCGTGTGTG CGCACGGACG CACACACACA CATGCATTCA 960 GGAACACTAG CACATGTTTA TGTATGTAAC TGGGTGCTTG CTGTATGAAC ATATGGATGG 1020 CAGCATGAGC AGATGCATGT GCATGTGAGC ATGAGCACAG AGGGTATGTA TGAGTGTATC 1080 AGCAGATGCA GGGTAAGAAG CACATTACAC TGTTGTGGTG GAGGGCACGC AGACATTCTG 1140 GGAAGCCACT TGCCCCACCC CTGGGCTGCT TCTTCTTGAG ATCAGGAGGG GCGTTGCCCA 1200 GGGCTGGTGT TGCCAGGTGG AGGCCTGCTG AGGCAGTGGT TGTGGGGATC GGTCTCCAGG 1260 CAGCAGGGGG CAGCAGGGTC AAGGAGAGGC TAACTGGCCA CGGGTGGGGC CAGCAGGCGG 1320 GCAGAAGGAG GCTTTAAAGC GCCTACCCTG 1350
|