EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-00520

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr1:27941440-27941940

Target genes

Number: 15
Name	Ensembl ID

WDTC1	ENSG00000142784
RP11	ENSG00000243659
TMEM222	ENSG00000186501
U6	ENSG00000206888
SYTL1	ENSG00000142765
RP1	ENSG00000231207
WASF2	ENSG00000158195
AHDC1	ENSG00000126705
FGR	ENSG00000000938
IFI6	ENSG00000126709
CHMP1AP1	ENSG00000226662
RP3	ENSG00000231344
STX12	ENSG00000117758
PPP1R8	ENSG00000117751
SCARNA1	ENSG00000252947

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP2

MA0516.2

chr1:27941514-27941531

CTCAGCCCCTCCCACCT

6.26

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_09188	chr1:27935305-27948984	CD14
SE_25377	chr1:27941496-27946866	DND41
SE_62470	chr1:27916580-27996594	Tonsil

Enhancer Sequence

GGAAGAAGCC AGAAAGTCAG CGGCAAAGCC CTACCCCGGG CCCCAGCCCC TCCTCCTCTC 60
GCTTGACCCC GCCCCTCAGC CCCTCCCACC TGGACCCGCC CCTCACTTAG GACCCCGCGG 120
GTGCCTCAAC CCCTCACTTG TCTCGTCCTG GCCCTGCTGC CAGACACGGA CTCTGCCCAC 180
ATCTCGTTTC TTCTGTTCCT TGGTGTTCCG GACACGACCC ACCCAGACTC CGCCCCAGAC 240
CCTCCCTCAT TCCCGATTCT GCCTTCGTTA GCCCAAGCCC TACCCGCCTA ACACCGGAGG 300
CACCGCCCCC CTCCCCAGCT CCCTAGTGGT CTCACTCGGC CCGGCTCCCA CCTCAGCCCT 360
CCAGTCGTTT TACACACCTG GTCCCTTAGT GGGACTCTGC CCATTGTCCC TTGTCCCTCA 420
CAGATCGCGT CCCAGGTCCC ACGCCTGAAA ACTCCCCTCT TAACTTCACC CCGAATCCCG 480
CCCGACCAGG CTCCGCCTCC 500