EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-00486

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr1:27623260-27623530

Target genes

Number: 22
Name	Ensembl ID

RP11	ENSG00000229985
SNRPEP7	ENSG00000225990
WDTC1	ENSG00000142784
Y	ENSG00000252098
TMEM222	ENSG00000186501
U6	ENSG00000206888
SYTL1	ENSG00000142765
MAP3K6	ENSG00000142733
FCN3	ENSG00000142748
CD164L2	ENSG00000174950
RP1	ENSG00000231207
GPR3	ENSG00000181773
RP4	ENSG00000241169
WASF2	ENSG00000158195
FGR	ENSG00000000938
IFI6	ENSG00000126709
FAM76A	ENSG00000009780
RP3	ENSG00000231344
STX12	ENSG00000117758
PPP1R8	ENSG00000117751
SCARNA1	ENSG00000252947
RPA2	ENSG00000117748

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6B	MA0731.1	chr1:27623394-27623411	TGCTTTCTGGGAATGGA	+	6
CTCF	MA0139.1	chr1:27623352-27623371	CAGCCAGCAGAGGGCGCAC	+	6.9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I027296

chr1

27623301

27623450

Enhancer Sequence

CTAGCCCCAG CCCCAACCCT AGCCCCAGCC CCAGCCCTAG CCCCAGCCCC AGCCCCAGCT 60
GAGTAATGCC ACGGTGAAGT TGTGTCCCTC GCCAGCCAGC AGAGGGCGCA CGGGCTTTTC 120
TTTATGTCAG AACTTGCTTT CTGGGAATGG ATCTTACTCT GGGAGAACAG TCCCACGATG 180
GAACCATCAG ACCCCGTGAT GGAAGCTAGA GGGCTGCCAG GAAGAAATGG GTCCTCTTCC 240
TGAGTTGTTG CTGTCACTTT CTCACTATCT 270