Tag | Content |
---|
EnhancerAtlas ID | HS051-00471 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr1:27069080-27072300 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr1:27070107-27070122 | GAGGTCAAGAGTTCA | + | 7.64 | RARA(var.2) | MA0730.1 | chr1:27070097-27070114 | GGGTCATCATGAGGTCA | + | 6.95 | RARA | MA0729.1 | chr1:27070107-27070125 | GAGGTCAAGAGTTCAAGA | + | 6.45 | REL | MA0101.1 | chr1:27070559-27070569 | GGAAATCCCC | - | 6.02 | RREB1 | MA0073.1 | chr1:27071320-27071340 | CCCCCACCCACCCCCTCAGA | + | 7.84 | SPIC | MA0687.1 | chr1:27069815-27069829 | TTCTTCCCCATTTT | - | 6.04 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_04138 | chr1:27069535-27072413 | Brain_Anterior_Caudate | SE_05292 | chr1:27069307-27073105 | Brain_Cingulate_Gyrus | SE_06169 | chr1:27068205-27072713 | Brain_Hippocampus_Middle | SE_07337 | chr1:27070095-27072347 | Brain_Hippocampus_Middle_150 | SE_08106 | chr1:27069480-27072753 | Brain_Inferior_Temporal_Lobe | SE_09344 | chr1:27065322-27075523 | CD14 | SE_11056 | chr1:27064362-27075593 | CD20 | SE_13430 | chr1:27069503-27071866 | CD34_Primary_RO01536 | SE_14400 | chr1:27069952-27073071 | CD4_Memory_Primary_7pool | SE_18323 | chr1:27064992-27075387 | CD4p_CD25-_Il17-_PMAstim_Th |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I026739 | chr1 | 27065546 | 27073238 |
|
Enhancer Sequence | TTAATAAGAT CTCTAAGTGA TTCATGTGTC TAATGGTTTA GAAGCACAGA GACCCTGAGA 60 GCTGAGAGTA AAATTTTCAA ATGAAATATC AAGCTGGTAG GCCAGGCACG GTGGCTCACA 120 CCTGTAATCC CAGCACTGTG GGAGGCTGAG GCGGGTGGAT CATGAGGTCG GGAGTTCGAG 180 AGCAGCCTGA CCAATATGGT GAAACTCCAT CTCTACTAAA AATATAAAAA TTTAGCTGGG 240 CGTGGTGGCA TGCACCTGTG ATCCCAGCTA CTCAGGAAGC TGAGGCAGGA GAATCCCTTG 300 AACCCGAGAG GCGGAGGTTG CAGTGGGCTG AGGTCGCGCC ACTGCACTCC AGCCTATGTG 360 ACAGAGCGAG ACTGTCTCAA AAAAAGAAAT ATAAAAAATA TCAAGCTGGG GCTTTGGAAC 420 GTCATAAATT TTACAGATTG TATCCAGTAA TATTTAAGTA ATCTCTGAGT GTGGGAGACC 480 ACCACCAGTT GTTTCGTGCG TGTTTTGGGG ACCCTGGCTC CCAGTGCCTT ACCCAGTTCA 540 GAACCCATAG TGGAGCCATC CACAGCTCCC AGCATACCTC TGCAACTTCA TCTCCAGCCA 600 CTCATTTGTA CCTTAAGCTC CTCACAATTC CTGGTCCTCT TGATTAGGAT GTATACCTGT 660 TTCTCTCTCT TTCTGTCATG CTCAGCAAAC TTCTACTTTG GCTTCAAAAC CTAGCTGGAA 720 TACTCTCTCT GAGACTTCTT CCCCATTTTC ATATTGGCAT AGCCTTATGC TGGTACCTCT 780 GCTTGAACTG TATCTGACAT CTGTCATGTT GTGCCCAGAA CAGGCAGATA TTTGTAAACC 840 TTTGTTGAAT ACCTCCTAGA TTCTTGCTAC CTAGTTGAGC TTTGGGAGCT GACGTTTTGT 900 TGTTTAGGTT TATTGAGAGG AGTGACAAAT CCTCTCAATA AATGCTTTAA AAATTAGAAC 960 ATTTGGCTGG GCACGGTGGC TCACACCTAT AGTCCCAGCA CTTTGGGAGG CTGAGGCGGG 1020 TCATCATGAG GTCAAGAGTT CAAGACCAGC CTGGACAACA TGGCGAAACC CTGTCTCTAC 1080 TAAAAATACA AAAATAGGCA GGTGTGGTGG CAGGGGCCTG TAGTCCCAGC TACTCGGGAG 1140 GCTGAGGCAA GAGAATCGCT TGAACCCGGG AGGCAGAGGA TGCAGTACTC CATCTCAAAA 1200 AAAAAAAAAA AAAATTAAAA CATTTGAAGG ATTTTAATTT TACACAGTTT CTGTTCCCTT 1260 TTGTTCATTT CATGATAGAA GGAGAGAGGG CCCACAGTCC TTATCTAGGT TTTTGATGGT 1320 TGATTTTCAA AAAGATAACA GAAATGTCAC TAGCGATTTT GGTAACCAGA GAAGCAGGGT 1380 CTTTCTGAGG TTGGTGACCT GTTTTCTTTA TAGCTGACCA TGTATCTGTG CCTGCTCCCC 1440 TTGAATTATA GCCCAGGTGC TCTCTCAGAG TCTCGAAAAG GAAATCCCCA CCCCCTCTGT 1500 CATATCTGCC CAGACTGCTA AGAGCAGCAT GTACCCTGTG CATGTAGCCA TCCCTTCTCT 1560 AGAACGCTGG TTCTCTGGGC TGGACTGGCC AATCCGCTTC TCCATCTTAG TCACACTGTT 1620 CCAACCCTGA TACTGCCTGC TGACTGCCTG AGCCTGTGCT GCTTGCAGCA GATTACTGTA 1680 TGCTTGTTCC TGGGCCCATT TCCTGTTTCT ATTCTAGTCG CTGGTGGCTC AGCTCTGCTT 1740 CCTGCCTGTG TGTCTCACAC AGATTCCTCT TGCTGGAACC TTTTGTTTCC TTCGGAACAG 1800 CCTCAATCTT TGAAAAGCAA CTGAGCCTTA ACTCTAGTAT GATGGCTCTT GAGTCACTTA 1860 GTCCTACAGA GGTCTGGCTG GAAGTACCTC TTCCCCATTA AGCACACCGT TTGAATTTTA 1920 CCTTGTTTTT CAGTTTGTCG TCAGCCCTGC TGTAGGAAGT TAAGTTGGGC CAAACTTGTC 1980 CTCACTTATT AGTACACAGA GCTATCGGGA CTGGTATGTC CTGATTCTTT TGTACCTGGA 2040 GCTTTTAAAT GTATTTCCTA CTACTCAAGA AGACACTTGG TATCCTCTCT GGCCCAAGCT 2100 TCCCTGAAGC CCAGGTGATA CTTATTTTGA GTTGGGCAGG TTATGCCATC CTCAGCAGAA 2160 TAACAGGCTG CAGAAAACAT AGGGATGGAA AAGAAAGCGT GTGCTGACTC AACCCTCCAT 2220 CCTGTGTGAG CAATTCAAAC CCCCCACCCA CCCCCTCAGA GCTTAGGGTG AGAGAGAGAA 2280 AGTACAGTGA GGTTGTAAAA AGGGAAGAAG TGAAGGAGGT TGTCCTGGAC AAATGTATTT 2340 AAAGGCCTAA GGCTCCCCCC TCTTGCCCAT TTCCTACAAA AAATATGCTT CGTGAATAAA 2400 TCTTTTTTCT CTTCCTTTAC AGCCACTCTT TTGGGATCAT TTGATAATAC TGAGTCAGAG 2460 GATTTCTGTA CTGGACCCTA GGTCTAGCTA TGTTTAAAAG AGAGAGATTT AATATAGGGA 2520 ATTTGGGCTT ACAACTGGAA GGAGTGAGGG AGCTTGCTCT AGGCTTGGCC TCCAAGAAAC 2580 CAGACCCAGA TTTAACCTAG ATTTGACCTA CCAGGGGAAC GTCTATCTCG GAGCTACTAT 2640 TAGATTGATT GCTCTTGAAT CATACCCCTA AACCTGTGGT CCAGAATCAG TAAACTGGAA 2700 TCAAGAAGCA GTAGCTGCTG CCGCCAGAAC CAGCACCCAG TTAAGTGGAG GATGGAACCA 2760 AAATGCTCCT GCAGAAACAA GTAAAGGAGA CAGAAATATG GTCTCTGCTT ACTTTGATCT 2820 AATCTCATGA GTCAGCTTCT CATTAGCAGA AGCTGAATTG TATCCAAAAC CAAGGGATTC 2880 TTGGAAATTT CGTTTTTAAG CTTTTTAACC TCTACAATTA GAGAAAGAAT AGAATGGAGG 2940 CTGCATGAAC TAGCCCAACA GAATATTTAC AATACTGACA CCCCATTCCC GTCTCCCCTC 3000 CCACCCCCAA CTTTACATAT GACGAACCTA AGGCCCAGAA AGGGCAAGAG ACTTGTCCAG 3060 GGTCATTCAG TAAATGAGAA CATTGGATTC TCTGACTGCT AGTCCAGTGG TTCTACTGTT 3120 GCTTTTACTG TTAGGACCAA CTCCTGTACA AGACCAGCAA AAAGATCCTT TAAGAAAAGG 3180 CCGCAGGCAC GGTAGCTCAC ACCTGTAATC CCAGCACTTT 3220
|