| Tag | Content |
|---|
EnhancerAtlas ID | HS051-00309 |
Organism | Homo sapiens |
Tissue/cell | Fetal_thymus |
Coordinate | chr1:19786980-19788380 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Myod1 | MA0499.1 | chr1:19787556-19787569 | AGCAGCTGTCTCT | + | 6.32 | | Nkx3-2 | MA0122.3 | chr1:19788154-19788167 | TTTAAGTGTTTAT | - | 6.71 | | Nr2f6(var.2) | MA0728.1 | chr1:19786989-19787004 | CGATCTCTTGACCTC | - | 6 |
|
| | Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
| SE_12250 | chr1:19787358-19788690 | CD3 | | SE_13780 | chr1:19787768-19788714 | CD34_Primary_RO01536 | | SE_14589 | chr1:19782676-19793243 | CD4_Memory_Primary_7pool | | SE_15716 | chr1:19787600-19788856 | CD4_Memory_Primary_8pool | | SE_17553 | chr1:19780030-19800464 | CD4p_CD25-_CD45RAp_Naive | | SE_18042 | chr1:19782765-19793570 | CD4p_CD25-_CD45ROp_Memory | | SE_18410 | chr1:19780065-19788738 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19269 | chr1:19787031-19788456 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_21829 | chr1:19787496-19788715 | CD8_Naive_7pool | | SE_22220 | chr1:19787200-19790952 | CD8_Naive_8pool | | SE_22607 | chr1:19787028-19798132 | CD8_primiary | | SE_23237 | chr1:19787082-19788131 | Colon_Crypt_1 | | SE_23924 | chr1:19787148-19788087 | Colon_Crypt_2 | | SE_26537 | chr1:19787149-19788136 | Esophagus | | SE_31164 | chr1:19787029-19787592 | Fetal_Thymus | | SE_31447 | chr1:19787084-19788259 | Gastric | | SE_47234 | chr1:19787628-19788752 | Panc1 | | SE_50058 | chr1:19787000-19788372 | Sigmoid_Colon | | SE_52345 | chr1:19787064-19788419 | Small_Intestine | | SE_62519 | chr1:19761354-19815005 | Tonsil | | SE_65446 | chr1:19787716-19788117 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | GGATGGTCTC GATCTCTTGA CCTCGTGATC CACCTGCCTC GGCCTCCCAA AGTGCTAGGA 60
TTACAGGCGT GAGCCACTGT GCCCAGGCTT TTTTTTTTTT TTTTTTTTTT TGTATTTTTG 120
GTGGAGATGT TGCCCCGGCT GGTCTCAAGC TCCTGAGCTC AAGCGATCCA CCCACCTCAG 180
CATCACAGAG TGCAGGGATT ACAGGCATGA GCCACCAAGT TCTGATCAAC GGTACTAACC 240
GCAGTTTCAG GCATCCACTC GGGGTCTTGG CACACATTCC CCACGGATAG GGGAGGATGG 300
CTGTATCACT CCTTAAGAGC AACAGGCAGC CAGGGACCCC AGCTCAACAC CCACCGACAC 360
ATGATGTCTA CTGTGTTCTG AACATGCATA AGCATATAAT TTGAACTGCA TTGTTAGCCT 420
TCAGGAAAGG GGCACCAGGA GCTGTGCTGG CCAGGTACCT AGATCATTTA CTGTTCAAAA 480
CCAACCCAGG AGCTGAGCTA CTGAGCTCAG CCTCCCTCTC TCAAGGCTGG GAAAGGAAAG 540
TTCATCTTCA CTCAGATGCA AGCTTCAAGT AGGCAGAGCA GCTGTCTCTT ATTCACCCCT 600
GGGCGGGGGC GGGGGGGGGA GGGGCGGGTT CCAGCACAGC ACGTGGCTCA TGGGCTGAGC 660
CTCCAGAAGT ATTGTTAGTG GATGGGAGAA TGGATCTTCA TATGGGCTTA GAGAGGTGAA 720
GGGACTTGCA CAAGGTCACC CAGCTAGTAA GCAGGGGGTG GAGCCCACTT TCAGGTCCAA 780
ACTGGCAAGC CTCAGCATAG GTCACTGTTG CTTTGCAAAC TGGCAACCCT CAGCATAGGT 840
CACACAGAGG GACAACTGAA CGTTGTAGGA CCAGGCTCTG CCTCCTTCTC TCTCCCCCGA 900
CCCACCTGCC ACTCCTTGGA GCTCCTGGCT GAGGCGGAGC TTCACCCAGC CTGAGCTGAG 960
CATGGGCATC CAGAGGCACT CCAGTCGGGG TCTGTTTCAC AGAAGCAGGC CCTTCGTGAA 1020
TATGCATGAG GGGCATGAGC TGGCTTCCAC GCATGCTTCC TGCTCACCTC ATCCTAAATC 1080
CTAAACCCGC AGGGCCATTG CCCCCTTGAC TTGAGCACTA GGGTAAAATC TATTTTTGTA 1140
AAAACCTGAT GGAACTTTTA CTTAAAATAA GAGTTTTAAG TGTTTATGGA AACGAAATCT 1200
ATCTTTTAGA AGCCACTGCA TAAATACTTA ACTGAAGAAG AGTTTGGAAT GGGGCAAGCC 1260
TGAGTAGGAA TCCGAATGCT ATGGATCACC AGAAACATCA TAACAGGCGA ATTACCTACC 1320
CTCACTGAGC CTCAGTTTTC TTGTCTCTAA AACTAGGATA ATAACACCTA GCTCACTGGG 1380
GTGAATGAAG ATTAAGTCAT 1400
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