Tag | Content |
---|
EnhancerAtlas ID | HS050-40739 |
Organism | Homo sapiens |
Tissue/cell | Fetal_stomach |
Coordinate | chr2:240217030-240218710 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF1A | MA0046.2 | chr2:240218530-240218545 | GATTAATGATTAAAC | + | 6.35 | RREB1 | MA0073.1 | chr2:240217432-240217452 | CACCAAAACCACCACCACCA | + | 6.04 |
|
| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_00920 | chr2:240217210-240219496 | Adrenal_Gland | SE_03499 | chr2:240217339-240218181 | Brain_Angular_Gyrus | SE_03965 | chr2:240217036-240218741 | Brain_Anterior_Caudate | SE_04828 | chr2:240216871-240222902 | Brain_Cingulate_Gyrus | SE_05792 | chr2:240215273-240223421 | Brain_Hippocampus_Middle | SE_07753 | chr2:240216845-240219573 | Brain_Inferior_Temporal_Lobe | SE_14931 | chr2:240214794-240218099 | CD4_Memory_Primary_7pool | SE_19756 | chr2:240217017-240218203 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_21369 | chr2:240216859-240217879 | CD8_Memory_7pool | SE_24090 | chr2:240217432-240217717 | Colon_Crypt_2 | SE_24090 | chr2:240217773-240218318 | Colon_Crypt_2 | SE_25334 | chr2:240216876-240230547 | DND41 | SE_25942 | chr2:240216803-240220040 | Duodenum_Smooth_Muscle | SE_26643 | chr2:240217012-240217997 | Esophagus | SE_30961 | chr2:240216964-240218667 | Fetal_Thymus | SE_39363 | chr2:240217025-240220367 | Jurkat | SE_40254 | chr2:240216894-240217940 | K562 | SE_40663 | chr2:240216982-240218595 | Left_Ventricle | SE_42224 | chr2:240217033-240217975 | Lung | SE_48049 | chr2:240216913-240236748 | Psoas_Muscle | SE_50196 | chr2:240217030-240219737 | Sigmoid_Colon | SE_51102 | chr2:240217185-240222174 | Skeletal_Muscle | SE_52573 | chr2:240217038-240218723 | Small_Intestine | SE_53377 | chr2:240216932-240220648 | Spleen | SE_54492 | chr2:240208054-240236422 | Stomach_Smooth_Muscle | SE_61583 | chr2:240173973-240272304 | Toledo | SE_65310 | chr2:240217519-240218598 | Pancreatic_islets | SE_66243 | chr2:240217025-240220367 | Jurkat |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH02I239293 | chr2 | 240215296 | 240227314 |
|
Enhancer Sequence | TGATTATAGT AAACTGGCAA GGGTGAAAAG CAAAAGAGCA GATTTTTATT CATCCAAAAG 60 CTGGTTACAT AAAAACCAAC GAGAATGAGA CAAGATGGGA GCCGGAAGGA AACACATGAA 120 AATGTTCACA GCTGAACCCA GGGTGACAGG ACTAGGAGTC AGAGACTCTC TCCTTCATAC 180 GCCTTTGTCC TTTCTAAAAC TTCCCAGAGC AAACAGGTCC TCCCTTATCA TTAGAAAGGA 240 GAACAATGCA CCCTGGTTTG TTAAAGGAGA AAGCTCTTGG CATTCTCACT TTGTAATTTG 300 CTGTTTCCTT TCAAGCTCAG CCTCTGGGAG GCTTTTCATT CTGTTTTGTG TCTCGTTTAC 360 CATTCCCGTT CAGTTTCATT TTATTTCTTA AATGGACATC CTCACCAAAA CCACCACCAC 420 CAACAAAATC ACTACCAATG ACTTTTGCAC AAACAGACCA AAGAAGTGGG CCACCTGTGT 480 GAGTTCTAGG GCAGCTGTCT CTCCAAACCA CATCACAAGT GCCCCCAGAG CCCTTCATTG 540 TCTTTCTCAG CCTCTTCACT GCTCTGTCAC CAACTCACAC TTCATTTGCA ACAGCTTCTT 600 ACAGGGTGCT GAAGGAAGAG CCAGTAATTA GAGCTACCAG GCAATGGGCG CATCTACAGA 660 GGGACTCTTC ATCTTCACAG AAGCAGCAGA GAGCTGAGGA TGCTATCACG CCCATTTTAC 720 ATGAGGACAC TGAGGCACAA AGAGGCTCAG GGATGGTCCA AAGTTAATCC AGCAAGAAAA 780 GGGGAGCACC AAACTGGAGC CTGCACAGGC TGACCTGGAG CCGTGTCCTT GAGCACTCTG 840 CTTGTTCAAT CAGAAAGCCA CCACTCTCAA AGCACACACA CACACGCACA TATGCAGGTA 900 TGCACACATG CACGCACACA GAGGATGTGC TTAGCTGTAT GTGTGCCCTG GGCGTGGACA 960 CCAGCACTCT GCCCAGAAGG AGGCCAATAC CCGCCTGGAC CAGGGTCTCT GCAGACAGTG 1020 GCACAGGGCG GTCATGGCCA GTCCTGCAGC GCCCTGGCCC AGCTGGTTTT CTGGTTTTTC 1080 CCCATTTCAC TGGCTACAAT GGCTCCTTTT TCAGATGCAG GCAGCCAGCT GAGTGCTGAC 1140 ACTCTAATTC TAAAGGTCAC CCCGTGACAT TTCCTGCAGC CTCAACTACC TTCCAAGGCC 1200 TCAGCAGATC AGGGTCACAA TGCTGGCCGG CATTTAAGAG AAACTGCGCT GTTTTCTTTT 1260 TTAGGACTTC GCATTTATCT AATCATTTCT GGATCTTTTT CCTTGAAAAT AAGTCACTAA 1320 ATAACAAACC GAGGCAGCAC TGCTTAAATG TGTCCCCAGA CAGGGATGAA ATGGGGTGCC 1380 TGTCCACTGT CGGGCCCCGG AGCTGTGCTT CAGTCAGGTC AAGGGAGCAT GGGAACCAGG 1440 ACTTTCACCT CCGCCCGGGA GATTCTTCGG GGCAGATATA TTTAGAAAGC GTGGATTAAT 1500 GATTAATGAT TAAACTCACT CACCAGGTCT GTCAAAAGTG GACAGTCCTG GAGCCATTTG 1560 CCCTAATTTC CCTCAACATT CAATATTTGA TTGTCCCCGC CAAAGAAGTG ATCAGCTCTC 1620 CAGATGGCTC CAAAAGATGT TCGTGGGGCT GCAGGGAACA AATAAAACTC CCATTTCTGT 1680
|