EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS050-34499

Organism

Homo sapiens

Tissue/cell

Fetal_stomach

Coordinate

chr19:50230330-50232060

Target genes

Number: 32
Name	Ensembl ID

SNRNP70	ENSG00000104852
AC011450.2	ENSG00000235555
TEAD2	ENSG00000074219
PIH1D1	ENSG00000104872
ALDH16A1	ENSG00000161618
SNORD33	ENSG00000199631
RPS11	ENSG00000142534
SNORD35B	ENSG00000200530
FCGRT	ENSG00000104870
RCN3	ENSG00000142552
Y	ENSG00000207073
NOSIP	ENSG00000142546
PRRG2	ENSG00000126460
PRR12	ENSG00000126464
RRAS	ENSG00000126458
SCAF1	ENSG00000126461
BCL2L12	ENSG00000126453
PRMT1	ENSG00000126457
CTB	ENSG00000243829
FUZ	ENSG00000010361
MED25	ENSG00000104973
PTOV1	ENSG00000104960
PNKP	ENSG00000039650
TBC1D17	ENSG00000104946
AKT1S1	ENSG00000204673
ATF5	ENSG00000169136
NUP62	ENSG00000213024
IL4I1	ENSG00000104951
U3	ENSG00000221125
SIGLEC11	ENSG00000161640
VRK3	ENSG00000105053
ZNF473	ENSG00000142528

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr19:50230669-50230680	CCACACCCTCC	+	6.32
Nr2f6(var.2)	MA0728.1	chr19:50231388-50231403	GAGGTCAGGAGTTCA	+	6.22
RORA	MA0071.1	chr19:50230985-50230995	ATCAAGGTCA	+	6.02

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH19I049726	chr19	50230228	50231450
GH19I049728	chr19	50231635	50231822

Enhancer Sequence

TGTACCTATA TAAACACCTC AGATCAAATG GAGAAAAATA TCAACAAGAT ATACAAACAA 60
CTACCTGGCT ACCTTCATCA TACTCAGACT GGTACAGAAC AGCTGGGGTC CCGGCTAAAC 120
CCTATCCTTA AGCCTGGAAC CGCCGCCCTA AGTGAAAACA GCTGACCCCA TTTTTCCATC 180
CAAATGTTGC CTTTTTGGCC TGCCACACCT CTATCCTGTG CCCACAAAAA GACTGCCGCT 240
GGCAGAGCAA CACAAGCGGC TGATGGCTGA GCATCAAAGA CTACGGATAG ACACGGCTAA 300
CTTCAGATGG CGCAGCTTCA GGGAAAGATC ACCTTCTTCC CACACCCTCC CCTGGCCTCC 360
ATTCCACTGA GAGCCACTTC CATCACCCAA TAAAATCCTC CCCATACACT ACCCTACAAT 420
CTGTTCGTGT GACCTAATTC TTCCTGGACA CCAGTCAAGA ACCCGGATGC TGAGAGGGCA 480
GGGGCTTGGA CGCTCCCGCA CAGAGCCTGC TCCCACCAGA GAGGAGTGAC TGGCCGGCTC 540
CAGCGTTTGT TCCCTTCAGT TCCTGCACTC GCTTGCTCCC ACGCTCCCTC TCATGAGGAG 600
TCACCAGCAG CAGGCTGAGC CAAAAAAGCC ACTCCAGTTC CCGCCCATGA AGAGGATCAA 660
GGTCAAGGTG ATGTAGGAGT TAAGACGAAA TCACTTAGAC TGATAGGGCA AGGGAGTCCT 720
TGGTAAGGCT TTCCTTTTTA ATGAAAAGCA GCCCCGAATC ATTTTCTAAT GAAGAGCGGC 780
TTGTAAAGTT GAGCTGCAGA GATAGGCATG CAAGCTGGGA GCTTGCCTGG GTGAACGCCG 840
GCCTGGCGGG AACAAGGAAC TAGGGACTAG ACATGTTCAA TATGGTGGCT CCATCTTCCC 900
TTCTCTGCCA GCCACGTGTA CAGTTAACGA GCAGACAAGA GGGCTCTGGC CATGGGGAGA 960
GTTCATTTAC ATAATAAGAT TAGGGTGGGG AGGGCTTGGC TCGGTGGCTC ACGCCTGTAA 1020
TCCCAGCACT TTGGGAGGCC AAGGCGGGTG GATAACCTGA GGTCAGGAGT TCAAGACCAG 1080
CCTGGCCAAA ATGGTGAAAC CCCATCTCTA CTAAAAATAC AAAAATTAGC TGGGCATGAT 1140
GGCGGGTACC TGTAATCCCA GCTACTCGGG AGGCGGAGGT TGCGGTGAGC CGAGATCGTG 1200
CCATTGCACC CCAGCCTGGG CAACAAGAGC GAAACTCTGT CTCAAAAAAA AAAGAAAAGA 1260
AAAAAGAAAA AAAGATTAAG GAGGCCTATA TAATGTTTGA GCAGGGAATA AAGTAGGAAT 1320
TTGGCAGGAC TAACTTCCAA GACAACATGT GACACGACCC TGCTGATAAC ACAGGAGACA 1380
GTAAAAGAAA CTGGCCAAAA CCAGCTGGAA CCAAGACAGG ATGAAAGCGA CCTCTGGCTA 1440
CCCTCACTGC TCATTATACA CTAATTAGAA TGCATTTGCA TGCCAAAAAC ACTTCCACCC 1500
GCGCCATGAC AGTTTGCAAA TGCCACGGCC ATGCTGAGAA GTTACTCAGT ATCATCTGGA 1560
TGGGGGAGAA AATTCGGGTT CTGGGAGCTC CCTGTTCCTT ACCCAGAAAA CTCATGTATA 1620
ATCCACCCCT TATTTAGCAT ATAATCAAAA AATAACTATA ACCATAAAAA TATATCAAAA 1680
CAGCCAACCA ATAGCCCTTA GGACTACTCT ACCTGTGGGG TAGCCACTCT 1730