Tag | Content |
---|
EnhancerAtlas ID | HS050-14892 |
Organism | Homo sapiens |
Tissue/cell | Fetal_stomach |
Coordinate | chr12:6330440-6332510 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EBF1 | MA0154.3 | chr12:6332360-6332374 | ATTCCCAGGGGACT | - | 6.59 | EBF1 | MA0154.3 | chr12:6332360-6332374 | ATTCCCAGGGGACT | + | 6.74 | EWSR1-FLI1 | MA0149.1 | chr12:6332399-6332417 | GGAAGGAGGGAAGGTATC | + | 6.45 | EWSR1-FLI1 | MA0149.1 | chr12:6332395-6332413 | GGGTGGAAGGAGGGAAGG | + | 6.56 | NFIA | MA0670.1 | chr12:6330769-6330779 | ACTTGGCACC | - | 6.02 |
|
| Number of super-enhancer constituents: 38 | ID | Coordinate | Tissue/cell |
SE_01613 | chr12:6329930-6330828 | Aorta | SE_01613 | chr12:6331068-6332334 | Aorta | SE_03308 | chr12:6331173-6332411 | Brain_Angular_Gyrus | SE_03988 | chr12:6328807-6336415 | Brain_Anterior_Caudate | SE_04905 | chr12:6328630-6346354 | Brain_Cingulate_Gyrus | SE_05857 | chr12:6328573-6346408 | Brain_Hippocampus_Middle | SE_06790 | chr12:6328750-6346091 | Brain_Hippocampus_Middle_150 | SE_07876 | chr12:6328735-6347463 | Brain_Inferior_Temporal_Lobe | SE_08879 | chr12:6331617-6331845 | Brain_Mid_Frontal_Lobe | SE_08879 | chr12:6331934-6332225 | Brain_Mid_Frontal_Lobe | SE_23086 | chr12:6329914-6330772 | Colon_Crypt_1 | SE_23086 | chr12:6330958-6332424 | Colon_Crypt_1 | SE_23760 | chr12:6330393-6330772 | Colon_Crypt_2 | SE_23760 | chr12:6331109-6332358 | Colon_Crypt_2 | SE_24754 | chr12:6331065-6332427 | Colon_Crypt_3 | SE_25881 | chr12:6328953-6330774 | Duodenum_Smooth_Muscle | SE_25881 | chr12:6331138-6332492 | Duodenum_Smooth_Muscle | SE_26531 | chr12:6328841-6332525 | Esophagus | SE_27879 | chr12:6330794-6343416 | Fetal_Intestine | SE_28805 | chr12:6330455-6345849 | Fetal_Intestine_Large | SE_31631 | chr12:6330908-6332515 | Gastric | SE_33937 | chr12:6330804-6332438 | HCC1954 | SE_35850 | chr12:6331075-6332437 | HMEC | SE_37940 | chr12:6328841-6332447 | HUVEC | SE_41013 | chr12:6328875-6330906 | Left_Ventricle | SE_41591 | chr12:6331083-6332422 | LNCaP | SE_42122 | chr12:6328842-6332515 | Lung | SE_48662 | chr12:6329940-6330890 | Right_Atrium | SE_48662 | chr12:6331176-6332445 | Right_Atrium | SE_50072 | chr12:6329914-6330978 | Sigmoid_Colon | SE_50072 | chr12:6330980-6332462 | Sigmoid_Colon | SE_52457 | chr12:6328999-6330794 | Small_Intestine | SE_52457 | chr12:6330890-6332501 | Small_Intestine | SE_54512 | chr12:6320070-6346293 | Stomach_Smooth_Muscle | SE_57134 | chr12:6331268-6332449 | VACO_400 | SE_57526 | chr12:6331004-6332437 | VACO_503 | SE_57940 | chr12:6331422-6332473 | VACO_9m | SE_64246 | chr12:6331037-6332392 | NHEK |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr12 | 6330976 | 6331800 | chr12 | 6332055 | 6332244 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH12I006213 | chr12 | 6322280 | 6345639 |
|
Enhancer Sequence | AAACAAAAGA GGAAACCATG GGCAGGGCCG CGAGCTGGGA GTAGAAGCTA TGGGCTCTCT 60 CCTGCATCCC CGCATCCCCG CCCGACCAGC TGGGCATACT ACAGGTTGCC ATCCTCTCTC 120 CAGAGCCCTG GGAACAGGGC ACTGTCTCAT TCAGCATCCG CATCAAACCT GCTCTGCTCC 180 TGGGATGATA GGCTGGGGTG GGGCAGCCAT CGAAGAAATT ACATGGTCAG CATGCCGCCA 240 TATGTCTGTT AATTAACCTG GGTGGAAGCC ATCGACCCCT TGGCCTCCCG GACTCCTATA 300 TTCTCATTTA TGGAGTCCCT GAATAATTGA CTTGGCACCC TCTTTTAAGG GTTAAAGCTC 360 TCTTTTTTTC TTGCTCCTGG CCCCTCCCAT TTAGTTTCTC CTATTATTAA AGTAGCTGAA 420 GCTGGGCGCA GTGGCTCACA CCTGTAATCC AAGTGCTTTG GGAGGCTGAG GCAGGAGGAT 480 TGCTTGAGGC CAGGAATTTA AGACCAGCCT GAGCAACATA GCGAGACCCC TGGCTCTACA 540 AAAAAAAAAA AAAAAAAAAG GGTTTAAAAT ATTAGCCAGG ATTAGCGGCA TGCACCTGTA 600 ATCCCAGCTA CTCAGGAGGC TGAGGTGGAA GAATGGCTTG AGCCCAGGAG TCCAAGGCTA 660 CAGTGAGCTA TGATTGCACC ACTGCACTCC AGCCTGGGTG ACGAGAGCAA GACCCTGTCT 720 CAAAAAATAA AGCAGCTGGG GTGAAAGCCG GATGGGGACA GGGGAGCCCC TCTATGCCAC 780 ACCAGAAAGT GAGTTCTCCT AGAAAATACT TCAGAGCGCC TTAGATAGCG CTGCCTGACA 840 ACCATGAAAG GCATTATTGG GTGGCACTGG TTATACAAGT TTTGTGACCC TGTGACCCCA 900 AGCCATTGTG ACTCAGCCAA CTGGAGCAAT GTCTCCAACA GCGTTACAGA AAATGGGGCA 960 GCTGATGGTT CACATAGCAT CCCCCCCGGC CGGTGAACTC AGTCATTCTG TCAGAAAAGG 1020 CAGCAGGGTT CACTCCTGAT TTTTGTCCAA GTGTTCCCAG TCATGCCCCT GGCCCTCCCT 1080 TTTCTCTGGG TTACTTGAAC CTTTCTCCTC TCTTATTGTG AGTTGTTAAG CCTGTGAGAC 1140 CGAGACCTAT GGCAGCTTTT CCCATTTCTC CAGAGCCAGC TGCTTTTCCT TCCTGGTTGT 1200 AGTGAAATGT TGTAGCTTTG ACAACCAAGC CGCATGATGT AAGGTTTAAG GTGGGGTCCG 1260 AATGCGGGGG ACTCCCGACT CCGGGCTTGG CCTGGCCCTT GGCCAAGATA AGAGACCTGA 1320 GATGCTTCCT TTTCCCTCGT GGTTCCAGTT CTCCAGCCCA GCATCCTTCT TACCACCTGT 1380 GCACAGAGAC CGGATCAATG ACTGGACTTA ACATATTGGC TCAGGGTCCT CGACATTGGG 1440 GCTCTCTATA AGATGGAAGG GGCCTTACCC CTGGAGGTTC CACTGGGGTA CCCTGTCATT 1500 ATCTGAGCGT GGAACATTCC CAGAGAGACG CAGCTCCTGC TCGTGAGAGG CTGCTGTGCA 1560 GAGCGTAGCT TTACCTCATC TTACAGCTTA GTTCCTTGGC AGACCTGGGA TTGTTTTCGT 1620 TCTTTTCTGC GACTCAGTTT TCCCAGCAGA TAAGGGGTGG GGTCATAACT TCACTCATCA 1680 GGGGAAGTAA GATGACTTGG GAGATAATTG CTTGATAAGC ACAAGCCTAG AGCAAAAAGG 1740 ACAGTAATGA GCACTGTCTC GCTATCTCCC TATGCGCGCA AGAGCATCAC AAGACCAGGG 1800 CGAGAGGGAG GACCAGGGTG AGAAACAGGT TGTGGCTAAA CGTGGACCAA AATTGAGCAC 1860 CGGCCTACAG TTTTCAGGTT AACGCTTTTA TGTCCAGGAG GCCAGCAGCT TCAGTCTTCC 1920 ATTCCCAGGG GACTGACTGG GCCTCCCTGG GGTTGGGGTG GAAGGAGGGA AGGTATCACC 1980 TTTGTACTTT TTTTTTTTTT TTTTTGAGAG GGAGTCTCGC TCTGTCGCCC AGGCTGGAGT 2040 GCAGTGGCGC AATCTCCGCT CACTGCAAGC 2070
|