EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS050-05543

Organism

Homo sapiens

Tissue/cell

Fetal_stomach

Coordinate

chr1:205633310-205633610

Target genes

Number: 11
Name	Ensembl ID

RP11	ENSG00000224717
CDK18	ENSG00000117266
U2	ENSG00000253097
MFSD4	ENSG00000174514
U6	ENSG00000206762
ELK4	ENSG00000158711
SLC45A3	ENSG00000158715
SNORA72	ENSG00000201944
NUCKS1	ENSG00000069275
SLC41A1	ENSG00000133065
PM20D1	ENSG00000162877

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_04481	chr1:205633217-205635318	Brain_Anterior_Caudate
SE_05240	chr1:205627476-205636463	Brain_Cingulate_Gyrus
SE_06134	chr1:205626253-205651465	Brain_Hippocampus_Middle
SE_07051	chr1:205632909-205650888	Brain_Hippocampus_Middle_150
SE_08345	chr1:205630539-205635036	Brain_Inferior_Temporal_Lobe
SE_23702	chr1:205631859-205635081	Colon_Crypt_1
SE_24440	chr1:205632059-205635080	Colon_Crypt_2
SE_41915	chr1:205633320-205634220	LNCaP

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I205663

chr1

205633120

205636532

Enhancer Sequence

AAATGAGATA ATCGCTATAA ATTATAAAAG GGCTAGCCAA AGGTTAGGAG CATTTCTCCA 60
GTGTCTCCTA TGAGCCAGGC TCTGTGCAGG ACCAGGGATC CAGAGGTGAC TGGGGTATGT 120
CCTTGGTATT CTCTTCTTTC TCTTGGTGTG CCCCCTCAGC CCAGGGTCAC CCTCCTGCCC 180
AGCAATGCCT TCCCAGCAGA CCACCTCTCC CTCCAAGCAG CTCCCAGGGC AGAGGTACTC 240
CTGTCCCACA TGCCAGGTGG CATGTATCTG GAACAGGAAG GAAGGAGGAT GTAGTGACTC 300